Claudine Devauchelle

Maître de conférence (UEVE)

tel : +33 1 64 85 35 55
fax :

Laboratoire Statistique et Génome
UMR CNRS 8071, USC INRA
23 boulevard de France
91037 Évry, France

Thèmes de recherche

  • Evolution moléculaire
  • Etude évolutive des topoisomérases IA et des reverses gyrases
  • Etude des gènes dupliqués par neo- et sous-fonctionalisation (caractérisation et modélisation)

(dans ce cadre participation au programme ANR blanc 2011 Ploid Ploid Wheat porté par B.Chaloub)

  • Classification automatique de séquences
  • Recherche de motifs dans les séquences

Liens

Enseignements

  • L1/L2 Biologie - Informatique pour la biologie, Mathématiques pour la biologie, Méthodologie du travail universitaire
  • L3 Biologie - TD programmation fonctionnelle, TD système gestion de bases de données
  • M1/M2 Biologie - Programmation Python, Analyse de séquences
  • ED GAO - Unix et utilitaires Unix, Introduction à Biopython

Responsabilités

  • Directrice d'études du parcours Génie Biologique et Informatique (L3,M1,M2) - UEVE

Cours

Publications

Restrict to author: Restrict to theme:

List of publications by devauchelle ordered by year
2012
Journal article
  • Variable length local decoding and alignment-free sequence comparison
    Didier, G. and Corel, E. and Laprevotte, I. and Grossmann, A. and Devauchelle, C.
    Theoretical Computer Science Vol. 462 pp. 1-11
    http://dx.doi.org/10.1016/j.tcs.2012.08.005
2011
Journal article
  • Prevalence of MRI-defined recent silent ischemia and associated bleeding risk with thrombolysis
    Tisserand, M. and Le Guennec, L. and Touzé, E. and Hess, A. and Charbonnier, C. and Devauchelles, A.-D. and Bracard, S. and Mas, J.-L. and Méder, J.-F. and Oppenheim, C.
    Neurology Vol. 76 No. 15 pp. 1288-1295
Thesis
  • De l'art de résumer pour tenter de comprendre en génomique évolutive
    Devauchelle, C.
    Habilitation à diriger des recherches, Université d'Évry val d'Essonne   
2010
Journal article
  • Automatic detection of anchor points for multiple sequence alignment
    Pitschi, F. and Devauchelle, C. and Corel, E.
    BMC Bioinformatics Vol. 11 No. 445
    http://dx.doi.org/10.1186/1471-2105-11-445
  • MS4 - Multi-Scale Selector of Sequence Signatures: An alignment-free method for classification of biological sequences
    Corel, E. and Pitschi, F. and Laprevotte, I. and Grasseau, G. and Didier, G. and Devauchelle, C.
    BMC Bioinformatics Vol. 11 No. 406
    doi:10.1186/1471-2105-11-406
    http://www.biomedcentral.com/1471-2105/11/406
2007
Journal article
  • Comparing sequences without alignments: application to HIV/SIV subtyping
    Didier, G. and Debomy, L. and Pupin, M. and Zhang, M. and Grossmann, A. and Devauchelle, C. and Laprevotte, I.
    BMC Bioinformatics Vol. 8 pp. 1
In proceedings
  • Local Similarities and Clustering of Biological Sequences
    Corel, E. and El Feghali, R. and Gérardin, F. and Hoebeke, M. and Nadal, M. and Louis, A. and Laprevotte, I. and Grossmann, A. and Devauchelle, C.
    Actes de JOBIM 2007 pp. 69-71
  • Local Similarities and Clustering of Biological Sequences : New Insights from N-local Decoding
    Corel, E. and El Feghali, R. and Gérardin, F. and Hoebeke, M. and Nadal, M. and Grossmann, A. and Devauchelle, C.
    The First International Symposium on Optimization and Systems Biology (OSB 2007) Vol. Lecture Notes in Operations Research No. 7 pp. 189-195
    http://www.aporc.org/LNOR/7/OSB2007F22.pdf
2005
Journal article
  • Constructing Hierarchical Set Systems
    Devauchelle, C. and Dress, A. and Grossmann, A. and Hénaut, A.
    Annals of Combinatorics Vol. 8 No. 4 pp. 441-456
    http://www.springerlink.com/content/l8xyrlwpbucwh2jp/fulltext.pdf
  • Integer linear programming as a tool for constructing trees from quartet data
    Weyer-Menkoff, J. and Devauchelle, C. and Grossmann, A. and Grunewald, S.
    Comput Biol Chem Vol. 29 No. 3 pp. {196-203
2001
Journal article
  • HIV-1 and HIV-2 LTR nucleotide sequences: assessment of the alignment by N-block presentation, "retroviral signatures" of overrepeated oligonucleotides, and a probable important role of scrambled stepwise duplications/deletions in molecular evolution
    Laprevotte, I. and Pupin, M. and Coward, E. and Didier, G. and Terzian, C. and Devauchelle, C. and Hénaut, A.
    Molecular Biology and Evolution Vol. 18 pp. 1231-1245
  • Rate matrices for analysing large families of protein sequences
    Devauchelle, C. and Grossmann, A. and Hénaut, A. and Holschneider, M. and Monnerot, M. and Risler, J.-L. and Torrésani, B.
    Journal of Computational Biology Vol. 8 No. 4 pp. 381-399
by Stat & Génome
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