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Professeur des Universités (UEVE)
tel : +33 1 60 87 38 06
fax : +33 1 60 87 38 09
Laboratoire Statistique et Génome
UMR CNRS 8071, USC INRA
23 boulevard de France
91037 Évry, France
Traitement statistique de données génomique
Modélisation de séquences biologiques par des chaînes de Markov et leurs variants (HMM, …)
Génétique épidémiologique
List of publications by prum ordered by year
2009
Journal article
- An association study of 22 candidate genes in psoriasis families reveals shared genetic factors with other autoimmune and skin disorders
Oudot, T. and Lesueur, F. and Guedj, M. and de Cid, R. and McGinn, S. and Heath, S. and Foglio, M. and Prum, B. and Lathrop, M. and Prud'homme, J.F. and Fischer, J.
J Invest Dermatol. Vol. 129 No. 11 pp. 2637-45
2008
Journal article
- A note on allelic tests in case-control association studies
Guedj, M. and Nuel, G. and Prum, B.
Annals of Human Genetics Vol. 72 pp. 407--409
http://www.blackwell-synergy.com/doi/abs/10.1111/j.1469-1809.2008.00438.x
- Variants of the MATP/SLC45A2 gene are protective for melanoma in the French population
Guedj, M. and Bourillon, A. and Combadières, C. and Rodero, M. and Dieude, P. and Descamps, V. and Dupin, N. and Wolkenstein, P. and Aegerter, P. and Lebbe, C. and Basset-Seguin, N. and Prum, B. and Saiag, P. and Grandchamp, B. and Soufir, N.
Human Mutation Vol. 29 pp. 1154--1160
http://www.ncbi.nlm.nih.gov/pubmed/18683857?ordinalpos=2&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DefaultReportPanel.Pubmed_RVDocSum
2007
Journal article
- IRF5 rs2004640-T allele, the new genetic factor for systemic lupus erythematosus, is not associated with rheumatoid arthritis
Garnier, S. and Dieudé, P. and Michou, L. and al and Bardin, T. and Prum, B. and Cornélis, F.
Ann. Rheum. Dis. Vol. 66 pp. 828-831
- Linkage proof for PTPN22, the new rheumatoid arthritis susceptibility gene, a human autoimmunity gene
Michou, L. and Lasbleiz, S. and al and Prum, B. and Bardin, T. and Dieude, P. and Cornélis, F.
Proc. Natl. Acad. Sci. USA Vol. 104 pp. 1649-1654
- The ITGAV rs3738919-C allele is associated with and linked to rheumatoid arthritis in the European Caucasian population: a family-based study
Jacq, L. and Garnier, S. and Dieudé, P. and Michou, L. and al and Prum, B. and Bardin, T. and Cornélis, F.
Arthritis Research & Therapy Vol. 9 No. R63
Book
- Analyse Statistique des Séquences Biologiques
Nuel, G. and Prum, B.
Hermes Sciences
2006
Journal article
- Confirmation of the Shared Epitope Allele Classification
Michou, L. and Croiseau, P. and al and Prum, B. and Clerget, F. and Cornélis, F.
Arthritis Research and Therapy Vol. 28 pp. 79-
- Free Full Text Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination “hot spots”.
Drouaud, J. and Camilleri, C. and Bourguignon, P.Y. and al and Prum, B. and Quesneville, H. and Mezard, C.
Genome Research Vol. 16 pp. 106-114
In proceedings
- DNA sequence drives nucleosome occupancy of yeast promoters
Miele, V. and Vaillant, C. and D'Aubenton, Y. and Robelin, D. and Prum, B. and Thermes, C.
Proceeding of JOBIM
Article without referee
- Búsqueda automática de los genes
Prum, B.
- Las matemáticas en la búsqueda de un gen responsable de cáncer
Prum, B.
- Statistique en Génomique
Prum, B.
Book in a collection of books
- The use of Markov Models and Hidden Markov Models in genomics
Prum, B. and Tocquet, A.S.
Mathematical and computational methods in biology
Herman
2005
Journal article
- Identification of programmed translational -1 frameshifting sites in the genome of Saccharomyces cerevisiae
Bekaert, M. and Richard, H. and Prum, B. and Rousset, J.P.
Genome Research Vol. 10 pp. 1411-1420
- New classification of HLA-DRB1 alleles support the shared epitope hypothesis of rheumatoid arthritis susceptibility
Tezenas du Montcel, S. and Michou, L. and al and Prum, B. and Cornelis, F. and Clerget, F.
Arthritis Rheumatism Vol. 52 No. 1063-1068
- Rheumatoid arthritis seropositive for the rheumatoid factor is linked to the protein tyrosine phosphatase nonreceptor 22-620W allele
Dieude, P. and Garnier, S. and Michou, L. and al and Prum, B. and Cornelis, F.
Arthritis Research & Therapy Vol. 7
Invited conference
- Searching for the positions of nucleosome using Hidden Markov Models
Prum, B. and Miele, V. and Vaillant, C.
Geometry Of Genome, Leicester
Seminar and communication
- Applying detection of significant periods to transcription factor organisation in S cerevisiae
Hoebeke, M. and Richard, H. and Vaillant, C. and Miele, V. and Baudry, M. and Prum, B.
ECCB Poster
Article without referee
- Trouver les gènes coupables
Prum, B.
2004
Journal article
- A TNFR1 genotype with a protective role in familial rheumatoid arthritis.
Dieudé, P. and Osorio, J. and al and Prum, B. and Cornelis, F.
Arthritis Rheumatism Vol. 50 pp. 413-419
- Dense genome-wide linkage analysis of rheumatoid arthritis including covariates
Osorio , J. and Bukulmez, H. and Petit-Teixeira, E. and Michou, L. and al and Prum, B. and Olson, J. and Cornélis, F.
Arthritis Rheumatism Vol. 50 pp. 2557-2565
Invited conference
- Analisis of biological sequences by Markov models
Prum, B.
International Conference on Analysis of Genomic Data, Harvard Medical School (Boston MA),
Article without referee
- La recherche de gènes impliqués dans une maladie, collaboration avec Genset-Serono
Prum, B. and Bourguignon, P.Y. and Guedj, M. and Képès, F. and Matias, C. and Nuel, G. and Omont, N.
Matapli 74 p23-41
2003
Journal article
- Estimation of the inbreeding coefficient through use of genomic data
Leuteneger, A.L. and Prum, B. and Genin, E. and Verny, C. and Lemainque, A. and Clerget, F. and Thompson, E.
Am. J. Hum. Genet. Vol. 73 pp. 516-523
- Short inverse complementary amino-acid sequences generate protein complexity
Goldstein, D.J. and Fondrat, C. and Muri, F. and Nuel, G. and Saragueta, P. and Tocquet, A.S. and Prum, B.
C. R. Acad. Sci. Biologie Vol. 326 pp. 339-348
Invited conference
- Statistical analisis of genomes
Prum, B.
Royal Statistical Society Conference, Diepenbeek (Pays Bas),
- Statistique et génome
Prum, B.
Conférence plénière à la conférence européenne "Applied Mathematics and Applications of Mathematics" (AMAM), Nice-Antipolis
2002
Journal article
- Association Between Tumor Necrosis Factor Receptor II and Familial, but Not Sporadic, Rheumatoid Arthritis
Dieudé, P. and Petit, E. and al and Prum, B. and Cornélis, F.
Arthritis Rheumatism Vol. 46 pp. 2039-2044
- Mining Bacillus Subtilis chromosome heterogeneities using hidden Markov models
Nicolas, P. and Bize, L. and Muri, F. and Hoebeke, M. and Rodolphe, F. and Ehrlich, S.D. and Prum, B. and Bessières, P.
Nucleic Acids Research Vol. 30 pp. 1418-1426
Invited conference
- Cycle de 7 conférences sur l'analyse statistique des génomes
Prum, B.
6th Brazilian School of Probability, Praia de Toninhas, Brésil
- Statistical analisis of biological sequences
Prum, B.
15th National Symposium of Probability and Statistics (SINAPE), Aguas de Lindoia, Brésil,
Article without referee
- Trouver un gène responsable du cancer
Prum, B.
2001
Journal article
- Une approche statistique de l'analyse des génomes
Muri, F. and Prum, B.
La Gazette des Mathématiciens Vol. 89 pp. 63-98
Invited conference
- The use of MM and HMM in the annotation og genomes (2 conferences)
Prum, B.
Workshop on Statistical & Computational Genomics, Indian Statistical Institute, Calcutta, Indes
Article without referee
- La recherche automatique de gènes
Prum, B.
- Mathématiques et biologie
Prum, B.
2000
Journal article
- Inverse Complementary homologues of cysteine signatures
Goldstein, D.J. and Muri, F. and Saragueta, P. and Prum, B.
CRAS Sciences de la Vie Vol. 323 No. 2 pp. 167-172
Invited conference
- L'interface entre les mathématiques et la génétique
Prum, B.
Société Luxembourgeoise de Mathématiques
- Mathématiques et génome
Prum, B.
Ecole Polytechnique
Seminar and communication
- Une nouvelle frontière pour les mathématiques : la génomique
Prum, B.
GERMEA &ndash Pau
Article without referee
- Les chaînes de Markov dans l'analyse des génomes
Prum, B.
- Une approche statistique de l'analyse des séquences génétiques
Prum, B.
1999
In proceedings
- Searching gene transfers on Bacillus Subtilis using hidden Markov models
Bize, L. and Muri, F. and Samson, F. and Rodolphe, F. and Ehrlich, S.D. and Prum, B. and Bessières, P.
Recomb'99 Proceedings of the Third Annual International Conference on Computational Molecular Biology
1998
Book
- Processus sur un réseau, mesures de Gibbs
Prum, B.
Masson
1991
Book
- Stochastic processes on a lattice and Gibbs measure
Prum, B. and Fort, J.C.
Kluwer
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by Stat & Génome
