Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Alkaliphilus
Informations
Name
Alkaliphilus
Rank
genus
# topoisomerases
6
Lineage and sub-taxa
Lineage
Bacteria
>
Firmicutes
>
Clostridia
>
Clostridiales
>
Clostridiaceae
>
Alkaliphilus
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(714) DNA topoisomerase 3 [Alkaliphilus oremlandii OhILAs]
2
MYHHRIERIVNMNKKLVLAEKPSVGRDLARVLNCNKKGNGYLEGQEYIVTWALGHLVTLADPENYSDRYKSWKIEDLPILPSDLKLVVIKKTGKQFQTIKEQMHRKDVNEIIIATDAGREGELVARWIIEKAKVQKPIQRLWISSVTDNAIKDGFKKLKNGKDYEKLYQSAVARAEVDWIVGINATRALTCKYNAQLSCGRVQTPTLAIIAQREAEIQNFKSRTFYGMEAMSPHLKLTWQDRKTKDIRSFEKEKITSILNAIKNKDGYVMDVEKKYKKSYAPKLYDLTELQRDANRIFGYSAKETLGIMQQLYENYKILTYPRTDSRYITSDIVPTLKDRIKACGVGPYKLAANKVLQGSIKGNSSFVDDGKVSDHHAIIPTEQFVQLSSLSDKERKVYDLVVKRFLAVLYPPFEYEETFIRAKIGEEVFIAKGKNVIHQGWKEVYGNMDEDESGNEDISEQLLPRVNKGDVLKISSITQTTGQTKPPAPFNEGTLLSAMENPVKYMKDAHKDLIKTIGETGGLGTVATRADIIEKLFSTFLIEKRGNDIWITSKGKQLLELVPEDLKSPALTADWEQKLGAISKGDLHRDHFVKEMKAYTKTVVDEIKNSDETFKHDNLTRNKCPECGKYMLEVKGKRGKMLVCQSRECGYRKGVTQNTNARCPNCHKKLELRGEGEGQIFVCSCGHREKLATFKERKKQEGSKVSKKEVVKYMNQQKKENDGFANTALADALSKLKF
(1871) DNA topoisomerase [Alkaliphilus oremlandii OhILAs]
7
MKRLVIAEKPSVAKDIAKVLNCKEKREGYIEGSDYIITWAIGHLVILCDPEEYDIRYKKWDFNTLPIIPDKIKLKPNPKTYKQYQIVKALMLSSQIDEIICATDAGREGELIFRYIYELAKCRKPFQRLWISSLTDEGIRTGFEHLKDGKAYDALYYSAKCRSESDWLVGINGSRAYSIQYGSLLPIGRVQTPTLKIIVDRDLEIDDFVPKDYWEVKADFGNYSGIWIDLEKNESKIDSIQKAEDIKNKVLLKEGLVTDFQKKKVVKKPPFLYDLTELQRDSNKKFGYTAQRTLDIAQSLYEKRKAITYPRTDSRFLTKDIIPKLKSLINKIGLEGYKEFTSILEKLEKLPVNPRIINDRKVTDHHAIIPTEKKIDLNKFSEEEKNLYDLIARRFLAVFYPDYEYFSIVMITHVAGEDFKSNEQQTIHLGWKLLYSDKEVETKESTLIHIKKGSSSTLKSAEIEQKQTKPPARYNEALLLDSMENAGKFIEDEELKEQLKSSGIGTPATRASIIERIISVGYVERKGKNLISTEKGRKLIQITSQELSSPELTGKWEKALDKIAKGNMNPQRFMEGIGRFTKFIIEDVQKNTKNVVFEGYSKNRGKKSSGTSSYNSPIGICPACKVGKVLEGPKNFYCSEYKQGCKFGIFKEDILMKKFKKKMTKTMVSKLITNQVVTVKGMVSPKTNGKFDGNICLKQSSNGYWGWEFTNGGVNN
(857) DNA topoisomerase 1 [Alkaliphilus oremlandii OhILAs]
1
MTKSLVIVESPAKAKTIEKFLGKNYVVKASVGHIIDLPKSKLGVDIDNNFEPQYITIRGKGPVLKEIKTLAKKSKNVYLATDPDREGEAISWHLARALGIEASDDCRIEFNEITKNAIKSAIKKPRPINQDLVDAQQARRVLDRLVGYQISPLLWKNVRKGLSAGRVQSVATKLIIDREEEIKNFKPEEYWTLSLKIKTKNNENFEIKFQNDNLGNKEIHTEAEVDRILNHIQNHEAIVTSVKKGEKKRNPNLPFTTSTLQQEAANKLGFSTKKTMSLAQQLYEGIDIGKSGTVGLISYIRTDSTRISQESSESCKNYIHENIGESYYHSETKERKENKGKKNIQDAHEGIRPTDVYRHPDLIKGFLSKDQYTLYKLIWQRFVASQMAPAVYDTLNVEFDINKVIFKATGSILRFEGFLKVYSYANVSENINIPDLAEGEVVTVLEQMPKQHFTQPPGRYSEATLVKTMEDLGIGRPSTYSPTISTILSRGYVEKEGKSLTATELGYIINEILEDYFSKIIDTNFTAKLEQSLDYIEEGTQDWKKLISEFYEDFKVMLLNAEEHMEEINLVEESDEKCSKCDSVMLIKHGRYGKFLACSNYPECEETKPFLYKIGVSCPKCESGDVIEKRSKKGRLFYGCSTFPDCRFVSWNRPTGKKCPTCGDILVYKKTKKSEKNICINKECGFEEEIEN
(1430) DNA topoisomerase 1 [Alkaliphilus metalliredigens QYMF]
1
MAKSLVIVESPAKAKTIEKFLGKRNYIVKASVGHVIDLPKSKLGVDIDKDYEPQYITIRGKGPVLKEIRTEAKKAKRIYLATDPDREGEAISWHLANALNIDKNEACRIEFNEITKNAIKSAIKTPRKINHDLVDAQQARRVLDRLVGYKISPLLWQKIRRGLSAGRVQSVATKMIKDREVEINAFQPEEYWSLILQVQNMQKEKFEVKFQSDHLGNKDIKSEDEINIIINKIKDKQLMITEVKQGEKKRNPSLPFTTSTLQQEASNKLGYSTKKTMSLAQQLYEGIELGKEGSVGLVTYIRTDSTRISEEASQHVAQYITEKIGEHYLQKSTIVKKGKKSVQDAHEAIRPTDVTRSPDVMKPYLKKDQYKLYKLIWERFVASRMEPALFDTLSITLDVEGVTFKANGSRLRFEGFLKVYSLASRSEDTDLPVLNKDELTSIVEIDPKQHFTQPPPRYTEASLVRAMEEQGIGRPSTYSPTIATILSRGYVEREGRNLLPTELGILVTGILEDFFSQIIDVHFSAELENQLDEIEEGKKGWKSLIEDFYPSFEEMLKVAEEHIEEIHLVEESDEICDQCDAPMVIKHGRYGKFLACSSYPDCTFTKPIVHKIDVKCPKCEDGEIVERKSKKGRLFYGCSGFPSCRFVSWAKPINEKCPQCNEILAHKKTKKSEKITCTNSECKYERLIEDENEK
(697) DNA topoisomerase [Alkaliphilus metalliredigens QYMF]
3
MSKSLYIAEKPSVALEFAKTLNIKGNKKDGFIESNEAVVTWCIGHLVTMSYPDKYDDKYKKWVLKDLPFLPNKYKYEVIKNVKKQFDIIKTLMKRTDISTIYVCTDSGREGEYIYRLVDEMVNVKGKTKKRVWIDSQTEEEIKKGVKNAKPLDEYDNLANAAYLRAKEDYLMGINFSRLLTLSYGSALSKRLGKKYVVIAVGRVMTCVLGMVVQREREIREFVKTPYYKIISNFQLDQSMDYDGEWKAIESSNYYMSDLLYKDIGFKEVKSAEKFIRELKEDNTELTAVVETIKKKKETKNPPLLYNLAELQNELSKKLKINPDETLKVAQKLYEKKMITYPRTDARVLSNAVAKEIHSNLKGLLRVKQSCQLEPGDEGINDFIQKIVNEGLYKELQKTKYVNDKAITDHYAIIPTGEGLGSFNRLTDYEKETFLLIVRRFLAIFYPPAIFSQLSITTKIKTESFFTTSKVCIQEGYLEILNDGKKDGASSLDKEETLKKLKKGQTVKINKLEIKESETTPPKRYSSGSIILAMESAGKLIEDEELREKIKGSGIGTSATRSGILNKLQQISYIALNKKTQILTPTSLGESIYDVVDESIPSLLKPELTASWEKGLGMIANGEIQCDEYMIKLEAYIRKNTQKVLKLSNQPNLLNSRSIKSTTNKGNQDTKGKRVGRLALGKCIACETGEVLENSKAFYCSNWKQNCKFTVWKDSLKRYEQEIDEEMIKALLEKGQIDKVSIVLPQTNEKCTASLEFKDNKKGELQLKNVTPTTE
(354) DNA topoisomerase 3 [Alkaliphilus metalliredigens QYMF]
2
MKKKLVLAEKPSVGRDLARVLNCNQKGNGYLEGKEYIVTWALGHLVTLADPETYSQKYKSWKLEDLPMLPDEMKLVVIQKTGKQFNAVKSQMVRKDVGEIIIATDAGREGELVARWIIEKVGVKKTIKRLWISSVTDKAIKDGFNKLKNGREYDNLYASAVARSEADWIVGLNATRALTTKYNSQLSCGRVQTPTLTIIAKREEEIQRFQPKTFYGAQVVAGDLKLTWQDQQTNSMRVFDETKIDQVIQSIQNQEVKVVDISKRHKKSYAPRLYDLTELQRDANKIFGYSAKETLSIMQKLYETHKALTYPRTDSRYITADIVGTLKDRLQACGVGPYKAFAAKVMQSSIKANKSFVDDAQVSDHHAIIPTEQSIYLGALSDQERKIYDLVVKRFLAVLYPPFEYEERTINAKLGKEHFIAKGKMVIHQGWKAIYGHQTEVSEDEDIADQILPNLNRGDTLKVNAISKTTGKTKPPALFTEGTLLTAMENPSKFMSNEDKTLIKTIGETGGLGTVATRADIIEKLFSSFSIEKRGKDIHITSKGKQLLQLVPEDLKSPGLTAEWEQNLSAIAKGKLNKNTFVNRMKEYTKTIVKEIKNSEAAFRHDNLTANKCPDCGKYMLEVNGKKGKMLVCQDRECGHRKIVAQKSNARCPDCKKKLELRGEGEAQIFVCSCGHREKLSTFKERRKKDQDKASKGEVNQYLKQQKKEEPINTALADALAKLKLD
Family distribution
Taxonomy tree
Alkaliphilus