Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Planctomycetaceae
Informations
Name
Planctomycetaceae
Rank
family
# topoisomerases
5
Lineage and sub-taxa
Lineage
Bacteria
>
Planctomycetes
>
Planctomycetia
>
Planctomycetales
>
Planctomycetaceae
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(1764) DNA topoisomerase 1 [Pirellula staleyi DSM 6068]
8
MAKRASTGNKALVIVESPAKARTISKFLGPDYTVEASIGHIRDLPQGSKEIPKEYKGEKWAYLGVNVDDGFTPIYIVPPDKKQHVSKLKQLLKESDSLFLATDEDREGEAISWHLAEVLNPKVPVKRLVFHEITEEAIKGALANPRDIDDGLVRAQETRRILDRLYGYEVSQLLWRKVAPRLSAGRVQSVAVRMIVERERARMAFRSATYFDLLGRFASAEGKEFDAELVSVGGRRIPTGKDFDSTTGLLKDSKLLQMSEQEALALAERLKVAKFQVTGIEDRPYTRKPSDPFTTSTLQQEANRKLGFTARRTMDVAQSLYENGYITYMRTDSTNLAQVAIDAARDLVRTEYGDAFVPAQPRIYKSKVKNAQEAHEAIRPAGHPFKLPQNLRSELNPDQFRLFDMIWKRTIASQMADARGRNITITLEGDGAVFQVTGKTIEFAGFLRAYVEGSDDPDAELADQERILPSVDKGYPLNIKKLDAKSHTTQPPARFSEASLTAALEERGIGRPSTYASIIETILARQYVFKKGNALVPTWTAFSVSKLLEMHLPKLVDYQFTAQMEDLLDSISRKESEHGEYLRQFYFGDVKPQSDAGHSMAVGDEGLKKLLETKIQEIDARDMSRFSLGKPEEGGDEVFVRVGKFGPFIEQGERKASIQQETAPDEITLARALEMLNQASVAEEPLGLDPETQKPVYMKQGRFGPYVQLGTADDEEKPKNASLLKGMTPPDVTLEVALKLLSLPRNLGVHATLGEPIQAFNGKFGPYIKCGSETRSLPKEISPLEVTAEQAIELLAQPKTRGGGRGQAAAREPLRTLEPSPVTNEPIKLLAGRYGAYVTDGQTNASLPKDMQPETLTHEQAVQLLADRAAKAPAGGRGRRKAAPKKAAVKKAAPKKAAAKKGAKKAAPEKKKVVDVPFEVEE
(125) DNA topoisomerase 1 [Rhodopirellula baltica SH 1]
8
MSDKPESRTSETPIFPPRIGSFLLMAKSTSKSLVIVESPAKARTISKFLGSGYQVEASVGHVRDLPGGAKDIPKKFKKEPWAYLGVNVEKDFEPVYIVPADKKKQVDKLKAALKDADSLYLATDEDREGEAISWHLFELLKPKVPVHRLVFHEITKEAIQHALEDPREIDDGLVRAQETRRILDRLYGYDVSQLLWKKVGRGLSAGRVQSVAVRLIVQRERERIAFHDATYWDLEAIFTTDNGDSLPAMLATVDGRKIPTGKDFDSTNGQLINPELLQMDEQQAKELKQKLEKENFRVAKVEVKPFTERPKAPFTTSTLQQEANRKLGFTARRCMQAAQRLYENGYITYMRTDSTTLSKEAINAARDLVRSEYGEKFLHDSVRVYKGKVKNAQEAHEAIRPAGTPFRVPGAVQNELDRDQFRLFELIWKRTVACQMADAKKQRISVTIEGGGTTFTASGTSILFEGFLRAYVEGSDDPEAELADKERLLPAVNENDGLSVATLDPKSHTTQPPSRFSEASLTRTLEEKGIGRPSTYASIIDTIQRRDYVYKKGNALVPSWTAFSVIRLMETHFEPLVDYDFTAQMEDFLDTISRQEAESLQYLKRFYFGDETEPTGDEKAAIGLKPRLESKIEEIDPRVTAKFSLGIPTEGENREEVFVRVGKYGPFLEQGERKAPILEGMAPDEMTLARAMELFEDAAREDEPLGVHPETGKPIYIKAGRFGPYVQMGEKDDEEKKNASILKTIAVEDVDLEMACKLLSLPRDLGEHPEMKEPILAHDGRYGPYVKCGKETRSLPADKSPLDVTFDEAIELLKQPKTRGRAAPKEPIKKFEKPSPVTENEIKILEGRFGPYATDGETNASIPRGTDPKEMTFESVLDLLAERAAKGPTKKKKKKKAVKKKTAKKAAKKKTAKKKAAKKKTAKAAAKKKGIIKKSS
(1422) DNA topoisomerase 1 [Isosphaera pallida ATCC 43644]
1
MARFSAASPSRRTTRTSQERSPSRDASIALESHDPTDPIPRFDEVSTDASEPASAHNGATSAASPRTTRTKSVTKKPKAGLSSTATKRTSRKATSAKRSTDNGEPVEGTAGVGSRSGKRQALVIVESPKKAIAIGKFLGSGYVVKASKGHVRDLPKNVLGIDVDHEYRPTYEIIPKKEDTISELKRDANRADVVYLATDPDREGEAIAWHLKEALELPDEKVRRVRFHEITEKAVREAFQHAGPIDHHKVDAQQARRLMDRLMGYPLSQLLWKKVARHLNLSAGRVQSVAVRLIVEREKEIRAFVPEEYWEITATLSAQGKTDELDRFTAKLAEWKGSKFKVDHETQARAIRDALTAAEFVVRSVEDVEKKDPPAPPFKTSTLQQQASIRFRFSSDRTMSIAQQLYQGIDLGDGNTVGLITYMRTDSLRVSDEAIKGVREVIASRYGDAYLPVKPNQYEAGKLAQEAHEAIRPTDLSLTPESIQNRLTHDQFKLYQLIYRRFVASQMTPAIFAVTNVTIEAGEGVFKTQGKMLKFDGYRKVLPPAGKQEDALLPPLVPHQILDLHALEPSQHFTQPPPRYNEASLIKALEKENIGRPSTYATIIQKIQERNYVEQKDRRFYATNLGMVVTDLLVEHFPKMLDLKYTSHIEDELDRIMSAEARMVQVLDEFYHPFQDALKVAETRMPKVQIPSDKVCPTCGAPMVEKYNKAGKFLGCSRYPDCTTIMSADGTLKKAAVETEYQCLKCGKPLVMREGKRGEFLSCSGYPECKETYQLDEDGRLIPTREETDYICSKCGKPMLKRQGPRGPFLGCSGYPKCKNTIQLDDQGQPVKTIEIDVKCPKCGGPMAIKQSWRGPFLGCLNYPKCRGTAPIPPELKESHPELFVNTRAEDPIKAALKSLTIDEPCSKCGKPMVARQGKKGFFLGCTGYPKCREVREPDEATLERIQQAVAAAEGLTAGSPAAT
(631) DNA topoisomerase 1 [Planctomyces limnophilus DSM 3776]
1
MAAKQHKALVIVESPAKARKIGEYLGKDYIVLASMGHVRDLPSGAAEVPAELKKEQWATLGVNIDQQFEPVYVVPKDKKKTVKELKDALKTCSELILATDEDREGESIGWHLMKLLEPKVPVSRMVFSEITKDAIQKAIRNTRELDQNLVEAQETRRVVDRLYGYRLSPLLWKKVAPRLSAGRVQSVAVRVLVRREMERLAFRKGSYWDLKAALATASSARFDAALATVGGRRVAQGRDFDESTGRLKTDADVLLLDEAQSKALQTKLEESPDWVVSNVETRLQTRKPYPPFTTSTLQQEANRKLGLSARETMQIAQRLYENGFITYMRTDSVSLSQEAISASRACVTNRYGQEFLHPEVRQYTTKSKSAQEAHEAIRPAGVEMKTAEELSLNGREGALYAMIWKRTVATQMAEAQLRFQTVTIGTLDVEFRATGRHVEFAGFFRAYVEGSDDPEGALEDSEAALPPMEKGQKLTCKEVQALAHETKPPARYTEATLVKTLEEEGIGRPSTYASIIGTIQDRGYVRKQGNQLVPTFTAMAVTKLLEKNFSRLVDLQFTARMEQDLDDIANGQAERLPYLKSFYSGETGLDEQVKQNEAGIDPREACTLDIDGVNAKVRLGKFGAFFEGERDGQPVTATIPDDIAPADLTNELAEKLITQKSQGPQSLGIDPESGLPIFLLIGPFGPYLQLGEMKDGEKPRRVSIPKTRDVSTVKLEDALEYMKLPKALGPHPETGKVVKAGIGMYGPYVHHDKTYKSLDKTDDILQMTMERALELLAQARVRVPVAPLKELGAHPVDGDPVQIFEGKYGPYIKHGKTNATIPKERELDSVTLEEAVRLLDERVAKGGGSTGRRGGKKVTKKAAAKKAAASAAMATPKKATAKKKAAKKATKKSVS
(1661) DNA topoisomerase 1 [Planctomyces brasiliensis DSM 5305]
1
MVAKNDKYKALVIVESPLKAKKIGEFLGKDYVVRASLGHVRDLPSKASEIPAAVKKESWSTLGVNTSEKFEPLYVVPPDKKKLIKELKDLLKDSSELIIATDEDREGESIGWHLVQLLKPKVTVRRMVFSEITKTAIQEAIRNTREINEELVEAQETRRVLDRLYGYTLSPLLWKKIARGLSAGRVQSVAVRLLVRRELERIAFRSGTYWDLKAELKATEGNPFEAVLSTLGGKRLASGKDFDETTGRLKDGSDVLLLGQDEAERLQAQLLESPWKVSDIEERMSNRKPPAPFITSTLQQEANRKLGMSARQTMQTAQRLYENGHITYMRTDSVTLSNEAVQAARGRIEDLYGGDYLSPSPRQYASKSKNAQEAHEAIRPSGTEMKTPEELNLSGPEFKLYSLIWKRTMASQMAEARLKFLNVTIAVGEAEFKATGRQVVFPGFFRAYVEGSDDPEAALDDRDAMLPPLSQEESLDCKQLDPVAHETKPPARYTEASLVRMLESEGIGRPSTYASILSTIQDRGYVRKDGNQLTPTFTAMAVTRLLEDNFPNLVDTQFTAGMEQTLDDISNGQAERLPYLDRFYSGSDGLETQVKSREEQIDPRKACTLELSGLQSNVRVGRYGPYLEKDNDGEPMTASLPQEISPADVNNEMAEKLFELKAKGPESIGMHPEEGLPIFVLSGPFGPYLQLGEQQEDGPKPKRVSIPKNYDPTKVDLDLAVKLMELPRTVGQHPEDGKVVKAGIGRFGPYVQHDGKYKSLGKDNDVLTVGLEEAVELLKQARTKQAPKPLREIGKHPEDESVIAVFEGRYGPYIKFGKLNVTVPKDTDIHSITVEEAVQWIDEKAAKKGVKKKSAKKKAAKKSTKKKAAKKKATKKKAAE
Family distribution
Taxonomy tree
Planctomycetaceae