Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Pedobacter saltans
Informations
Name
Pedobacter saltans
Rank
species
# topoisomerases
4
Lineage and sub-taxa
Lineage
Bacteria
>
Bacteroidetes/Chlorobi group
>
Bacteroidetes
>
Sphingobacteriia
>
Sphingobacteriales
>
Sphingobacteriaceae
>
Pedobacter
>
Pedobacter saltans
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(1571) DNA topoisomerase [Pedobacter saltans DSM 12145]
7
MKVVIAEKPSVGRELAKVFGATTRKDGYIEGKGYTFTWAFGHLLQLAPPQEYGFYGWRKENLPMLPQKFKLSIRKIKTKDGVVEDPAVKKQLDTIKRLFDECDEIIVATDAGREGELIFRYIYYYLKCKKPFRRLWISSQTDEAIKNGFRNLKPGTEYDTLFNSAHARSQSDWLVGMNATQALSISAGNKSVLSLGRVQTPTLAMICARFLEIKNFVPKIYYQVAIQLCKDEQFFKAISTKNFDTKEEAEEVLAKVLDVESGSPTGGHIKNVEGKAKKEPPPLLHDLSSLQQEANKKKGYTADQTLGILQNLYESKLVTYPRTGSRYIGDDIFATVPDLISKYKNHGLFGKSAEYLLENKLNKRSVNAKKVTDHHAVLPTGIDPGYLPEDKQAVYDMVVGRMLEAFHQDCIKETTKISIESGSDFVANGTVIKIAGWRSVFNDPDDEKKDASENATLPKVDKGENLPVTKKAVVEKQTKPKPQYTEATLLKALETCGKDIEDEELRYAMKDSGLGTPATRAAIIETLITREYISREKKNLIPTSKGLAIYEVVKEKKIAQAELTGQWEKRLEEIRGGASVLDFKNEIIDYTRNITQELLAAGIGLEKVLVTG
(35) DNA topoisomerase III [Pedobacter saltans DSM 12145]
7
MKAIIAEKPSVAREIATLLGATEKRDGYLTGNGYEVTWALGHLVGLAMPEDYGVSGFQREALPILPNPFLLTVRKIKKDKSYVPDNGALKQLNIIEQVIGRCDSIIVATDAGREGELIFRYIYEYLKCRKPFERLWISSLTEKAIKQGFDNLKAGSDFDGLYRAGQGRSKADWLVGINASQALSISAGRGVYSLGRVQTPTLALICKRYLENKDFAVKKYFQIQLEHRKEFTDFKSLSKTKWDDRKLADDTLKSIQRNGTATVTAMETKTVTEQPPLLFDLTGLQKEANKRASYTAEETLNIAQSLYEKKFITYPRTGSKYIPEDMWSEIPALVRNLEARASCKKAVGKVKWGRFNKRIVNDVKVTDHHGLLITEKIPSELTAHENVIYDMIAYRLLEALSSACTKEITDIGLQAFHYDFTLKGCKIIEAGWRGIKGKFTDEDSDPVQELPELKVGDELKIKVASVLEKITKPPVLYTEAGLLSAMENAGKEIDNEDERKALKDIGIGTPATRASIIETLFKRDYIRREKKSLIPTHKGLQVYGAVKDKKIADVAMTAEWEMALQKIENNDANADAFHRDMETYATFITRELLDTGIAKEKQPELTCPKCKSRQLLVWNKVVKCPDEACGWLQFRIVCGVPLSVADIESLVTKGKTNLIKGMKSNSGNKFNAYIVMNDKAETSFEFENRKPKRK
(1349) DNA topoisomerase III [Pedobacter saltans DSM 12145]
7
MKTIIAEKPSVAREIAGLVGASDKKDGYLTGNGYFVTWAFGHLIGLGMPEDYGISGFDKASLPILPNPFLLTVRKVKKDKGYTADTGALKQLKVIEQLFKQSNSIIVATDAGREGELIFRYIYEYLKCNKPFERLWISSLTEKAIKQGFNNLKDGAAFDGLYQAAQGRSRADWLVGINATQALSIAAGNGIYSLGRVQTPTLALICKRYLDNKNFTVKKYWQIQLTHNKAQVDFKSISATKWDEKQLADDTLKAIQRGATATFTSVETKSVTEQPPLLFDLTGLQKEANKRLKLSAEATLNIAQSLYEKKFITYPRTGSKYIPEDMWAEIPNLVRALQNREDCKQALTKIKWGRFNKRIVNDLRVTDHHGLLITDKVPSVLNADENKIYNMIALRLLEAISQACVKEITDVSLQVLHYDFTAKGCKIQEAGWRSIKGSFTDDGEEPVQELPELHKGDELAIKEAAVLEKQTKPPVLYTEAGLLSAMETAGKEIENEEERKALKNIGIGTPATRAAIIETLFTRNYIQRDKRSLIPTEKGLQVYGLVKDRKIADVAMTAEWELALQKIENNEADAGTFQKEMETYAKSITDELLQTSIASTNQPKLTCPKCKSQQLIIRDKIVKCPDEACNWVQFRTVCGVQISIENVTNLVNKGKTSLIKGMTSKAGKKFDAYIILKENAESSFEFEKNKSSKRNGK
(1102) DNA topoisomerase 1 [Pedobacter saltans DSM 12145]
1
MAKNLLIVESPAKAKTIEGYLGKDFLVKSSYGHIRDLRKDDGAIEVDNNFKQHYEIPADKKQVVAELKKLAKSAETVWLASDEDREGEAIAWHLYESLGLKENQTKRIVFHEITKPAITKAIENPRTIDYNLVNAQQARRVLDRLVGFELSPVLWKKVKPSLSAGRVQSVAVRLIVEREREINLFNAESAYKIIAIFSTGKGKEIFKAELSQRYAEQKEAEKFLEDCKSALYKINDLDIRPTKRTPAPPFTTSTLQQEAGRKLGFSVSRTMSIAQRLYETGKITYMRTDSVNLSETALNASEIEINSAYGSKYHHKRIFKTKSAGAQEAHEAIRPTHFEWHTIEGDASEKRLYELIWKRAIASQMSEAQFEKTTARIGISTRKEELVANGEVLKFDGFLKVYLESEDEESDSHLDDKTDNGILPPLNIGQELILNEMTALERFTRPAARYSEASLVKKLEELGIGRPSTYAPTISTIQNRGYVVKEDRDGRSRTYKTFTLKDGEVKSIVKSEITGTEKGKLFPTDIGAVVNDFLVEHFKGIVDYNFTATVEKQFDEIANGLKEWTDMLKKFYQPFHSEVEDTLKNADRATGERLLGLDPESGKNVYTKVGRFGPMVQIGEMDEEDKPRYASLLKSQSVETISLEEALNLFQLPFQLSDYKDKEVSVGVGRFGPYVKWGDTFISLPKNEDPLTVTNERAIEIIEEKISIDAPVAEYQGHPVSKGKGRFGPFLKWKDLFINVPVRYNFDKLSQSDINELISAKIEKEANRYIQQWETEKIAIENGRWGPFIRFGKQMLKLGKNPTTGQKYTAEELSTVSLEDVKKLIVEQVPDAFDAKAKKTGRKTTKK
Family distribution
Taxonomy tree
Pedobacter saltans