Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Deferribacteres
Informations
Name
Deferribacteres
Rank
phylum
# topoisomerases
4
Lineage and sub-taxa
Lineage
Bacteria
>
Deferribacteres
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(1436) DNA topoisomerase 1 [Flexistipes sinusarabici DSM 4947]
1
MANVKSNQSPQKKGKNLVIVESPAKARTIERYLGRDFTVMASVGHVRDLPKNELGVEIEDNFTPKYKTIKGKKKIIDALKSAAKEADKIYLATDPDREGEAIAWHIATALKTKADNTYRVQFNEITKQGVNEGIKEPGRINMNRVNAQQSRRILDRLVGYKVSPLLWKPLKYGLSAGRVQSVALRLICEREEEIEKFVPKEYWTLDGYFKKSAGVPESKGEAVKARLEKKNGKKIEIPDEKKVREILNDLENKEAKVADVAKKELRQSPAAPFITSTLQQDANRKLGFTAKKTMMLAQQLYEGISLGSEGPVGLITYMRTDSTRVSSESVKQAKAFITKHFGEKFLGKGRSAKSQKKKAGTQDAHEAIRPTNVDKSPDNIKNFLTNDQYKLYKLIWDRFVASQMAPALFDQSTITITVGDYEFITKGKILKFPGFMKLYVESKENGENNEDSIIYDVEKDEKLEVKNYEEKQHFTSPPPRYSEARLVKTLEQKGIGRPSTYASIISTIIERNYVLLEEKKFRPTELGRIVNKLLISNFTNLFNAEFTAEMEKELDQVESGSKEWVELLNEFYKDFRKELNKAEEKFDADLTIDEKCPKCGKKLIIKYGKNGSFIACSGYPDCRFSCNFERDENGKIRLTDDKNGKSTGLKCEKCGSELVIKQSRCGEILACSAYPDCKNIKSFLRLKDGTLKVIEPGEKLEEKCPKCESELVVKSGKNGIFAACSSYPDCNYTANIKVDEDGNLKPQILKIDTVKCEKCDAEMVLKRSRRGSFFACPNYPDCKNTKAAVTNEDGLVTVKQKKAKSNTE
(430) DNA topoisomerase 1 [Denitrovibrio acetiphilus DSM 12809]
1
MPKNLVIVESPAKARTIEKYLGRNFKVLASVGHVKDLPASSLGVDLDNDFEPKYSIIRGKKKIIDELKKVANSAENIYLAPDPDREGEAIAWHIAEELGKKNKGKIYRVLFNEITKKGIEDGIKNTGPINENRTNAQQARRILDRLVGYLVSPLLWKSLKYGLSAGRVQSVALRLLVEREEEIEKFKPEEYWLIDVTFKGGQKALLKARLEKKNGKKYRVPNGEEAEAVLAALKAGSYNVNEVIRKEVFERAPLPFITSKLQQEAARKLSFSAKRTMMLAQRLYEGIELGSEGPVGLITYMRTDSTRVSPDATNEARGYIEKQYGKEFLSKGVKGGSKKKNVQDAHEAIRPTSVAITPESVKKILDTDQYKLYKLIWDRFVSSNMADAVYDQNTIHIANGPYLLKSQGKVMKFPGFQTLYIEGVDESKEKDQEVIFDVKEGETLNPEKHDSKQMFTQPPARYSEATLVKTLEAEGIGRPSTYASIISTLIDREYANMEEKRFKPTELGRVVCSLLIANFDRIFEPKFTAGMEEDLDSVEAGELTWKGVLRDFYAKFKPELEKAEKQFSANLKIEMKCPVCEKDLTIKYGRNGNFVACTSYPECKFTSNYERLEDGSFKLVPKEEDKPSGIECEKCGKELVFKKTRFGEVLACPGYPECKNIKNYVTLPDGEIKILAAGEEIGTPCPKCEAGLTIKGGRNGMFIGCKNYPDCDFTANMEVNEQGDIIPKYDKVDENVKCEKCGKPMVLKKSRRGKFFACTGYPECKNAKSTIVLEDGTISVKE
(1059) DNA topoisomerase 1 [Deferribacter desulfuricans SSM1]
1
MSKNLVIVESPAKARTIEKYLGKDFKVMASVGHVKDLPENELGVDIENGFKPKYRVIKGKKKIIDALKKEAEKSDTIYLAPDPDREGEAIAWHIAEEVKKKNPNIKRVEFHEITKKGVAEGISNPKDINIQRVNAQQSRRILDRLVGYLVSPLLWKPLKYGLSAGRVQSVALRLICEREEEIEKFVPKEYHLVDGIFLCNNHEIKARLEKKNGKKFELNTQEQVDNFKKEIKDHEFYVSKVEKKEVKQFAPLPFITSTLQQEAARKLSFSAKKTMMIAQQLYEGVELGAEGPTGLITYMRTDSTRVSDDAKSEAQNYILKRFGEKYCSNEKRVSKKKQNVQDAHEAIRPTSVLREPESVKNYLTQDQYKLYKLIWERFVASQMAPAIFDKSTIEISDGVYTFVARGKILKFDGFMKLYVEGKDNESENDEEGIIPDVKESDLAILKEIVSKQMFTSPPPRYTEATLVKALEQKGIGRPSTYATIISTIVDRGYVEVKERRFYPTELGRIVNKLLTTNFPKIFDVKFTAEMEKDLDQVEKGEIDWKKVLSDFYSSFEQELKKAENKLVMDLRIDKKCPECGSDLIIKYGKNGPFVACENYPDCKYSSDFKRGENGLIELVERKNGESTGLKCEKCGSEMVIKKSRFGEILACSGYPECKNIKNFIRLKDGIKVIEKNEKIDEKCPECGGNLFIKKGKNGLFLGCENYPDCKFTANFRVEDDKIIPVIKKIDDITCEKCGGKMVLKRSRRGSFFACENYPECKNTKSAITLEDGTITVKK
(515) DNA topoisomerase 1 [Calditerrivibrio nitroreducens DSM 19672]
1
MSKNLVIVESPSKAKTIEKYLGKDFKVTASMGHIKDLPEKDLGIDIENNFKPKYEILTGKKKIIKEIKKLAEDAQKVYLAPDPDREGEAIAWHIAEEIKDKNRNIFRVSFNEITEKGVQEGIKNPTEINIKRVNAQQSRRILDRLVGYQVSPLLWKPIKYGLSAGRVQTVALRLIVEREEEIEKFVPKEYWTIHGIFNVSESEIKGKLEKIDGKKAEIPDEKKVKEILEDLENKTGLISNIEKKEGKQSPYPPFITSTLQQEAIKKLGFTAKKTMMIAQQLYEGVELGSEGPTGLITYMRTDSTRISDTARKDARDFIQKNYGKEYLGNTNRTNKSKNNNVQDAHEAIRPTSVNRTPDDVKKFLTPDQYKLYKLIWERFLASQMADAIFEKTVIDIEVGKYLFRAVGKILVFPGFMKLYTETVEDAEDEDQQILPSVNINDTAIPNRYDTKQNFTTPPPRYTEASLVRVLEQKGIGRPSTYANIISTIQERGYVELKEKRFYPTELGRFVVKLLIDNFDQIFEVGFTAEMEKKLDEIEEGKLDWLELLNDFYRSFKHELEKADRQFVTNLKTDILCPQCKKGYLNIKFGKNGFFLACEHYPECNFTSNFTRDEQGRIVLTENKGGFEETDILCDKCGTRMVVKRSRFGEILTCPRYPECKNIKNFLRDKDGKIIVIDNGYVLDEKCPECGGELQLKKGKNGLFIGCKNYPKCTFTSNYTINEEGKVAIKPKSTVEEFQCEKCGGQMVLKRSRRGIFYACSNYPECKNTISAVKKEDGSISPKK
Family distribution
Taxonomy tree
Deferribacteres