Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Acidobacteriia
Informations
Name
Acidobacteriia
Rank
class
# topoisomerases
5
Lineage and sub-taxa
Lineage
Bacteria
>
Fibrobacteres/Acidobacteria group
>
Acidobacteria
>
Acidobacteriia
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(139) DNA topoisomerase 1 [Granulicella mallensis MP5ACTX8]
1
MAKNLVIVESPAKAKTIGKYLGSDYVVEASIGHIMDLPKNDIGVELKLRTFEPTLIVSPGKEKIVDRLKKLAAKSDAVFLAPDPDREGEAIAAHLKFQLLPSIKDKSKMRRVTFNEITKKAVKAAFEHTREVDENLVDAQQTRRVLDRLVGYQISPLLWDKVRRGLSAGRVQTVALRLIVEREREINAFNPVEYWNIDAVLAPEKNGQEFTARMVGVKGLPIRVSNGTDAEGKEQFLSNALPDKEAVDEVMSQLEKATWRVRSIEKKERRQNPRAPFTTSQLQQQAAGRLGFNVRRTMGVAQRLYEGIELGSEGTVGLITYMRTDSTRISPDAVKDIRDWVQKKFGANYLPAKENVYKSKKDAQDAHEAIRPTSISFVPDEVRKYLSDEQYRLYKLIWERAVTSQMTPAIFDQTTVDIEAKADVSYDFRTTGSILKFDGFLRFDEEAKKARAARDAKASAAAIAEEKKTAAASADGDSAAEASKDATSEESSSERRLPELKDGQNLEKIKLDPQQKFTQPPPRFNEASLVKTLEEKGIGRPSTYASIINTIQERDYVKKLAQKLVPTEIGMVVTELLVKNFPYIFETGYTAQLEGELDAVEEGSEKWTDLLKGFYGHFEKELKVAETQMEDIKRMELETQEICDKCGSPLVLKWGKFGSFYSCSAFTKAKPITVAQGPFKKDPKAAVKKVLDTFQFPMRVKAMNDDVAEFSEEVADKSALMESLQRAAALGKKQSVKLVVEPESCDFTKENFSAKPDLNSPEADGEQEDEFCDNCGRTMVLRNGPWGPFMACPGYNEDPPCKTIRKLTQKVQSKPPVVLEEPCPKCGKPLLQRDGQYGEFVACSGYPKCKYVKQELLDVPCPKCGGEVAVRKNKRGDLFYGCTRYPKCDFTSNQRLVNETCPKCDSAYLVEYANSEGTFLICPNNREALPKRRPRKGAKEEEAPTTPECSFEKKIGPPKLKEAPAELTKPDPEKTKTLVEAMA
(1501) DNA topoisomerase [Acidobacterium sp. MP5ACTX9]
7
MRVFLAEKPSVAREIAQALGCTHKEQGFFRGKNDLVTWAIGHLVRFAEPGEMNPAWGKPWRREALPMLPKDGGWLLIPEPRTEDQFNVVARLFGDKRITQIVNATDAGREGEAIFRRIYALSGASKPVLRFWTSSLTEEAIASALSHLRPAADYDNLASAALTRAQLDWLIGMNHSRAATLHNSVTCSVGRVQTPTLAMIVRRHHEIAGFIKTFFYEVHADLGEFVARAVNSQQKHDFEIKAEAETILRDVPSDTLATVTLVEVKKNRKAPPQLHNLGELQKEANRRFGFPADRTLAIAQSLYESKAITYPRSSSRHLSEDMVDGLPAVLKALRLGEERASYVKQALHRAQHGPALSKRFVDGSKLSDHHAIIPTAKPAPASLSGDERKVYTIVAERFLAIFLPDKETEDTRIDLEIAKHPFRARGSRLIAPGWTVLTGNQDFENKAADAEDRQALPAVKKGDELEVVESELVTKERKPPSRYTDATLLAAMETAGREIDDDELREAMKGRGLGTEATRAAIIQRLLDLAYVIRDGKQFEPTGKGIALIAQVLPHLASPELTGDMEAKLNLVEAGQLDAAEILAEVSESLRHEIPAVFRSKPMQAPDAPRITAGKDELLCPKCKAGLVTKRSTPNASAPFYGCARFHDGCNFTINTVVAKKTLTETNIKDLCSPTRHHTTKIIKGFTSKAGKKFDAFLQLSSATDFKTEFVFPR
(357) DNA topoisomerase 1 [Acidobacterium sp. MP5ACTX9]
1
MSKSLVIVESPAKAKTINKYLGADYTVEASLGHIMDLPKSDIGVELLNRTFAPTLIVSPGKEKIVDRLKKLAAKADHIFLAPDPDREGEAIAAHLAMQLRPVIKAGADIRRVTFNEITQKAVKAAFLKARDVNENLVDAQQTRRVLDRLVGYQISPLLWDKVRRGLSAGRVQTVALRLIVEREREINAFVPVEYWTVDAVLQAEKTSFTARLTGIDGARITVPNGFDKDGKAQVLANALPDHATTDQVVADLANATFAVKTVEKKERKQNPKAPFTTSKLQQEAAGRLGFNVRRTMGVAQRLYEGIEIGGETVGLITYMRTDSTRVSDDAVAEARTYIGALGERYLPAKPNEYKKKNEAQDAHEAIRPTNVAYHPDEIRASLSDEQYKLYRLIWMRFVASQMMPAIFDQTTVEIGAKAARSYDFRVSGSVLKFDGFLKVYETAPAASTAEASDEDGEEEDKRLPALADGQGLVRQAIEHEQKFTDPPPRFNEASLVKTLEEKGIGRPSTYASIINTIQDRDYVKKIGNKFVPTEIGMVVTELLVKNFPYIFETGYTATLEGELDAVEAGTEKWTDLLDGFYSHLEKELAVAETTMEDIKRKEEATDEVCDNCGSPLILKWGKFGSFFACSAFSKAKAVTIAAAPWKKDPKAVLKKILGSFHFPMIVKAVTFDETNFSKEVADAKEFAEAVKSAAGKGKKITAEPVSCDFTKENFAAKPDLNAPGADEAPEEEFCDNCGRLMVLKNGPWGPFMSCPGYSDDPPCKTIRKLTQKVQSKPPITLDEPCPKCGKPLLQRDGAYGEFIACSGYPKCKYVKQELLDVKCPKDGGDLAVRKTKRGDVFYGCVNYPKCDFASNLKLVNETCPKCHSAYLLEYGNKEGTYLVCPNNREFLPKRRPKKGQPVEVPTTPECTYERLIGPPKTVEAEPEMAVSAA
(1166) DNA topoisomerase 1 [Terriglobus saanensis SP1PR4]
1
MAKNLVIVESPAKAKTINKYLGSDYIVEASLGHIMDLPKNGIGVELKKRTFEPQLIISPGKEKLVEKLKKLAAKADAVFLAPDPDREGEAIAAHLEMQLTGSLKGKSTIQRVTFNEITKKAVIEAFTHARKVDANLVDAQQTRRVLDRLVGYEISPLLWDKVRRGLSAGRVQTVALRLIVDRENEIKAFNPVEYWPVDANLRPSGNKQNFTARLYAVDGQRISVETVGAPAFADESTTKNAVAQLEKAKWTVASVEAKERRRNAPAPYSTSRLQQDAANRLGFNVRRTMGVAQRLYEGIELGPEGTVGLITYMRTDSTRVSPEAISEARTYIKSLGEKYLPEKPNSFKGKKDAQDAHEAIRPTHVAMTPEKIKKFLSDEQYRLYRLIWQRFVASQMTAAVYDQTAVEIEAKADRTYNLRVTGSVLKFDGFLKVAEPAKSDAMVQKTADAMKTENPGEGEEDEDKSLPALKAGQALDLVDIVTEQKFTEPPPRFNEASLVKELEERGIGRPSTYASIINTIQERDYVKKISKKFIPTEIGMVVTSLLVKNFPYIFDMAYTAKLEDELDLVESGEEKWTSLLDGFYTHLTDEIKIASEEMEEIKRWEKPTDEKCEKCGSPLILRWGKFGSFYACSNYSKIKPMTIAVSGYKKDAKAVATKITAKFKFPFAIKGMVDDAEAFSEEVHDAKELTAALKLAAERGKKIVADPVSCDFTKENYADKPDLAAGDAQGTEEEEEYCDNCGKQMVLKNGPWGPFMACQDYNADPPCKTVRRLNQKVQQKPPEPTGEPCPLCGMELVKRTGAYGEFVSCSGYPKCKYVKQVLLDVPCPKDGGAIAERKARTGNYFYGCTNYPKCDFTSNQKLVSGPCPKCNSSYLLEVAKEGTIHLVCPNNTEALPKRRKKKGAEEVTTPVVECTFEKDTGVAVETAPAKEATPLARPDPEKTRPLVEAVA
(1774) DNA topoisomerase 1 [Acidobacterium capsulatum ATCC 51196]
1
MSKSLVIVESPAKAKTINKYLGKDFQVEASIGHIKDLPKNKLGVDVEKGTFEPELIVIPGKEKVVDKLRKLATKVDTIYLAPDPDREGEAIAAHLEDELKAVVKKPEAIRRITFNEITPKAVTAALDHARSVDRNLVDAQQTRRVLDRIVGYQISPLLWDKVRRGLSAGRVQTVALRLIVEREQQIKAFKPVEYWTIDAVLKTGGNPQEFTAHFIGIDGERARVETVDAPALPDQKLTDEVVAQLHKADWSVREVERKERKRNAPAPFTTSKLQQDASRQLGFNVKRTMGVAQRLYEGIEIGGDAVGLITYMRTDSTRVAPEAIEAVRGYIQKKVGKDYLPAAPNAFKSKKDAQDAHEAIRPADPNLHPDDIRKYLSDEQYKLYRLIWRRFVASQMMPAIFDQTTVEIAARADRRYDFRVTGSVMKFDGFLRVYEEVKEKKDADDEALANKLPALNNGDRLALSALKPEQHYTEPPPRYNEASLVKELEERGIGRPSTYATIINTIQDREYVQKMGGRTGRFIPTEIGTVVTGLLVKNFPYIFDTKYTARLEEELDDIEDGKERWTDLLNGFYDHFEDELKDAATNMEDIKRMEKPTDQKCDICGSPLVLKWGKFGSFYACSAYDKKKKDGCTFTKENYEAKPNLAAPSDEAEQEEEYCENCGRVMVLRNGPWGPFMACPGYNEDPPCKTVRRLNQKQQQKPPQPLDEKCPKCGEQLVLRHGQYGEFISCSGYPKCKYIKQNTIGMKCPQCKVGEIVEKKARRGNFFYGCSEYPKCDFTANYKPVDRKCPECGSAYLMEKTLKSGVYLVCPNNKKPSAEEETTTKRKKKGDTGEGVSCSFTERIGDAPSEAPAATATKPAAKPTAKTHGPVVEELAKV
Family distribution
Taxonomy tree
Acidobacteriia