Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Sphaerochaeta
Informations
Name
Sphaerochaeta
Rank
genus
# topoisomerases
6
Lineage and sub-taxa
Lineage
Bacteria
>
Spirochaetes
>
Spirochaetia
>
Spirochaetales
>
Spirochaetaceae
>
Sphaerochaeta
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(1274) DNA topoisomerase 1 [Sphaerochaeta globosa str. Buddy]
1
MDNANTLIIVESPTKAKTITKFLPSSCKVVASKGHIRDLPEDRMAIDVEHEFACDYEVVSGKESLIKELKSSLKKADRLLLATDEDREGESISWHLLEVLKPKIPFQRMVFHEITKSAITKALEGGRPLDENLVKAQEGRRIIDRLYGYTLSPTLWKKLSNKKLSAGRVQSVGLRLTVQRERERLAFQQSTYFDAKAELLAEQKQHFEAKLTAYQGHRLANSKDFDSISGQYKAKGQVLQLSREQAQAIVKELKAEPFRVQDIQRKPFVTRPNIPFTTSTLQQDAIKKLHISASDTMRIAQKLYENGFITYMRTDSPSLSQEGTQAARSQVDQLYGQEYLSPSARYFAAKSAGAQEAHEAIRPAGERFLIPSETHLIGKELALYELIWKRTLASQMAEAKKATTTVTLEAGEGTFTATGTEIVFPGFLRAYVEGSDDPDAALEDKETLLPAMKVGQVCPLASLVEVEHQTKSPARYTEAYLVQELEKRGIGRPSTYATIIKTLLDRRYAIKEGSALAPTFIGFAVCQFLETNFPQFVDYDFTSMMEDGLDKIASGELDKIVFLSSFYCGESGLLSQNALQLKQDNKVVSKTLILPHISDKNPVMIGPYGAYVIDANEAFISLPLSWIPGNITDEDVKTLIANGKEKQQPVTLGSGAVKGEAVKVMNGRFGPYWQEGEGKDAKRASIPKWVQDANRSEELELANRYLSLPRNLGKDEDGNEVLAYKGKYGPYIASNNKTRNLKKTDHDQELFSITLKEALALLSQEVEKSGAKGKKGGARSAKASTVKDLGQFEGEAVSVATGRYGFYLKAGKENIALPDAYKKDEEKALSLTLDEAVEHIRTKRAKE
(761) DNA topoisomerase [Sphaerochaeta globosa str. Buddy]
7
MKKLVLAEKPSVGRELARVLNCYKRETGYIEGEHYIVTWALGHLVELAQPAAYSERYKRWSLRDLPMLPPVLQQEVIEQSKDQFAVVKSLIKRPDIESLVIATDAGREGELVARWIMKLADYQGPAHRLWISSQTEGAIKEGFANLKEASLYDNLYKAAESRAAADWYVGMNVTRALTCHYDAKLSAGRVQTPTLALMTRREDEIEAFSGQFYWTLKADFIHFSASYYPTEDTIRITEEATAKALEASLVGKQGRVVSLETVQRNEQPPLAYDLTELQRDANNLLDFSAKQTLDVLQALYEQHKIVTYPRTDSRYITTDIVATLPDRLRSLADTPFAPLCSGFVKDGFRVDEERFVQDLQVTDHHAIIPTEQRVNLSRLNAQEKALWELIVLRFLEVLSPDYIYQTTTLIAEVEESRFKTRLTIPVQQGWRSVATLIGKRSAQASLGEEDEASPALLSLKQGDGLTISSLKLRKLATTAPSRYTEATLLSAMEHAGRFVDDAKLKKRLSNGLGTPATRADIIEKLIQNHYIERAGKELVPTPKGRELVRLAPEELRSPELTGRWEERLGNIAEGKENGDLFIQDIKRNASALVTQVTGSSDVFSPHFPDAKQCPYCKTPMMKVVDEIGQNHYLCQKLSCSYEEMEVKKRVPKPQAAKPVEPEKKMVVKVKAVETDSVKKRVVVKKKAPVQAFSLPDEVEAPSYTWETVIEVVRPSKLAFRAERNERPPENRGGWRSPVQSSHLVEQTPSEGGSFADFLKLNEERKKRDRDKKRK
(1662) DNA topoisomerase [Sphaerochaeta coccoides DSM 17374]
7
MKKIVLAEKPSVGRELARVLGCTGKEKGFSEGPAYIVTWALGHLVELAQPAAYSESYKRWSIRDLPMLPKDLKQEVIEQTAEQFTIISTLFARPDVDGLIIATDAGREGELVARWIMKLGGWKGSVQRLWISSQTDSAIREGFSSLKDGDVYLNLYAAAESRAAADWYVGMNVTRAMTCRYDAKLSAGRVQTPTLALMCAREDEIDAFTGSFYWTLKADFGSFSASWRGKDDSARITNAQSAEDFEKSLPGKTGKITALTAQEKTVQPPLAYDLTELQKDANNVLDFSAKQTLDVLQRLYEVHKIVTYPRTDSRYISHDIVPTLADRLRALAGTPFGPRAGLYAGGMMRVDEQRFVQDEQVTDHHAIIPTEMKVDLKKLNTEEKALWELVIIRFLEVLSPDYTYTSTSLEAEADGQKFVTRFTVPLVQGWRDIARIIGRRSAVSDEDEGDSDSSLSGLKEGDDVAIVSVKTRRMTTAAPERYTEATLLSAMEHAGRFVDDVSLKKRLGNGLGTPATRADIIEKLLQNHYVEREGKSLVPTPRGRELIRLVPAQLRSPELTGRWEERLAGISDGSEDAAVFIRDIKKNASDLVDEVVASHLVFDPHFPDGKKCPYCATAMMRVVDEFERPHYICQKLSCSYEEMEVKKKVLLPPGQKAPESQKSPEKKKAETAGISTAKPVIPTKRVKPTSTVVVASSAGIVRKVVIKKRPPASVISVPDPVKKSQGVMNSFSLPDDEEPEYTWETVMEVVRPSKMANRRFNDRERSGQHEHGDFRRPSRAVGEGDAGSRSGEISRNGKAWGNAGKPVEEPVGAGGTFADFLAASQKRKEKDEEKRRERKKK
(421) DNA topoisomerase 1 [Sphaerochaeta coccoides DSM 17374]
1
MDSQKNEKVLIIVESPTKARTIKKFLPGNYTVVASNGHVRDLPSDRLGIDVKKGFKAEYEVVSGKGTLIKTLKADLKSVDRLLLATDEDREGESISWHLLELLKPSIPYQRMVFHEITKRAILNSLDTGRKLDMYLVHAQEARRKLDRLFGFELSPVLWKKLSNKKLSAGRVQSPGLRLIVERERERIQFVSSTYWDAKATLYSASPAFTAKLEALEGRRVAGSKDFNPTTGAFLKEGKADAPILLDADTARDVTEKLRSAEWTVAEVVEKPVTSRPAPPFITSTLQQEGNRKLHLSAKQTMTIAQKLYENGFITYMRTDSPSLSQDGIEAARKSVDELYGNAFLSDAPRQYAAKSASAQEAHEAIRPAGDVFIKPDESGLHGKDKALYEMIWKRTLASQMAEARKSLTSVRINAQADGVSARFVATGTQILFPGFIRVYVEGSDDPEAALEDKESFLPVLKEGQKLDLETLEAVSHETKAPARFTEASLVQQLEKMGIGRPSTYATIIDKLFDRSYVQKDGSALVPTFVGFSVVQLLEKHFDRYVDYSFTSGMEEDLDGIAAGKIDEIDFLTRFASGPQGLEAIVAEKMQEIVAPDAKKIDLPQLTGEPDIFIGPYGPYIISQSDDNGNVYVSLPRAWIPADVTKEMLEELLEKDWKIRKDGNDGGIGTDPRTGKTVFLISGRNGDFWQLGERVEGSKERPRTSSVPKGEDGQSLETALRYLALPRELGSDPATSVPVSAGIGKFGPYVTRGGEFRSLRGGETSVFTVTLEEALALLAQPKSAGRRAGSGRGGKIGGADKTLVLSFGDYKGEALAIHVGRYGYYLKHGKKNYQLPEASMKKDEAAAKTLTEDQARAIVDTKA
(1687) DNA topoisomerase [Sphaerochaeta pleomorpha str. Grapes]
7
MKKLVLAEKPSVGRELARVLGCRIREKGYSEGEGYVVTWALGHLVELAQPAAYSERYRRWSLRDLPMLPDVLQQEVIDQSQEQFQVVKTLLNRADIESLIIATDAGREGELVARWIMKLSNYTGPAQRLWISSQTDSAIKEGFEKLKDASLYDNLFHAAESRAAADWYVGMNVTRALTCHYDAKLSAGRVQTPTLALMTNREDEIESFAGQFYWTLKADFGTFSASWYSSEDTIRISTEKQATELEANLVGKEGVITSLETADKNEQPPLAYDLTELQRDANMYLDFSAKQTLDVLQRLYEQYKIVTYPRTDSRYITHDIVATIPQRLRALGTTPFGSYATSFANNGFRIDEQRFVQDLQVTDHHAIIPTEQRVDLARLSNEERSLWELIVIRFLEVLSPDYEYRTTTLVANVENQKFQTRLTIPVSQGWRDVARIIGRRSAASLMVDDVDFNSSLTSLTEGSPVQIASVKLRKLSTSAPERYTEATLLSAMEHAGRFVDDANLKKRLTNGLGTPATRADMIEKLIQNNYVERKGKELVPTPKGREVVRLAPLQLRSPELTGQWEDRLAKIAEGKEASGPFIADIKKNAQELVNQVVQSGETFAPKFTNSKSCPFCKGPMMKVVDEIGQDHYICQRLSCSYEEMEVKKRVPVVKAVSETAPKEEKPKAVVKVVAKAKPVVDATGKKKVLVMKKALPKAAPLTSFSLADDKEVNMARSYTWETVTEVVRPSKLAYRGAPVREERVHSKAQEDRPWGNTGKTAFEADNASQGGGTFADFLKASKERNKRNDGKKRK
(243) DNA topoisomerase 1 [Sphaerochaeta pleomorpha str. Grapes]
1
MDDTKVLIIVESPTKAKTITKFLPKTCKVVASKGHIRDLPEDRMAIDVANGFACDYKTVEGKESLIRELKSSLKGVDKLLLATDEDREGESISWHLLEVLKPKIPYQRMVFHEITKGAIQKALESGRDLDLNLVQAQEGRRIVDRLYGYTLSPTLWKKLANKRLSAGRVQSVGLRLTVERERQRIAFTKSSYFDAKVDLLSSDGQQFEAKLFSYQEKSIAQSKDFDSVSGIYKGKASVLLLDKNQLHAIVQDLNGAPYEIVDIQRKPFLTRPNIPFTTSTLQQDAIKKLHFSASDTMRIAQKLYENGFITYMRTDSPALSSEGTQAARLLVKQLYGPDFLSPTERHFAAKTAGAQEAHEAIRPSGERFRVPGETGLSGRELALYELIWKRTLASQMADAKKATTSVSIQANDALFTATGTQIVFPGFLRAYVEGSDDPDAALEDKESLLPPLSVGEICPLVKLSEVEHQTKPPARYTEASLVQELEKRGIGRPSTYATIIKTLLDRKYVVKDGPALAPTFIGFGVCQYLEDYFAQFVDYDFTSTMESGLDQIASGQLDKESFLEKFYLGAEGLENQNTLQLAQDNKVTSKTIRLSQISEENPIMIGPYGPYVLGSEVEGKAQYLSLPLDWTPGNITDEDVKALIARGKVKAEPEILGTGKVAGLPVQLLNGRFGPYWQEGEGKDAKRASIPKWVMDAEKQHELEIANRYLSLPRLLGKDKDGNDIVAAKGKFGPFISCNGEFRNLRKTDHDAQLFSITLEEALALLAEEKPKAGAKGKGKGSSSSAVVRQIGEFEKEPVALAIGRYGYYLKVGKDNIALPPKYKHDDELAKAISLEDAAEIIRTKRAKDSEE
Family distribution
Taxonomy tree
Sphaerochaeta