Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Dyadobacter fermentans DSM 18053
Informations
Name
Dyadobacter fermentans DSM 18053
Rank
no rank
# topoisomerases
2
Lineage and sub-taxa
Lineage
Bacteria
>
Bacteroidetes/Chlorobi group
>
Bacteroidetes
>
Cytophagia
>
Cytophagales
>
Cytophagaceae
>
Dyadobacter
>
Dyadobacter fermentans
>
Dyadobacter fermentans DSM 18053
Topoisomerases
Select all
Name
Family
Sequence
(1192) DNA topoisomerase 1 [Dyadobacter fermentans DSM 18053]
1
MSKNLVIVESPAKAKTIESYLGQDFTVKSSFGHVRDLPEHDMGVDVEHGFQPSYEISSDKVKVISELKKLAKDAEVWLATDDDREGEAISWHLKEALGLPDNTKRIVFREITKTALRNAIEKPRTIDTALVDAQQARRILDRLVGYELSPVLWKKIRIGKSNLSAGRVQSVAVRIIVEREREIDAFKSKSSFRVTAHFDLGNGKVLNAELAKNIPTEQEAQQFLEKCVGAEFSIRNLEVKPAKKSPAPPFTTSTLQQEASRKLSFSVAQTMTVAQRLYEAGKISYMRTDSTNLSEEALDKSKQQITKEYGIDYYNRRIFKTKSESAQEAHEAIRPTDFSTLLGSSDRNEQRLYELIWKRAIASQMSDAQLERTTATIGISTTSEELVAQGEVIKFEGFLKVYLESSDDEGDEEQKGMLPPLNIGQILKLADMKATERFTRNPPRYTEASLVKKLEEMGIGRPSTYAPTISTILKREYIVKEDRQGFEREFKEITLANEQIKSKVNKEVYGSEKAKLFPTSTGMVVNDFLVSHFQDIVDYSFTASVEKDFDHIADGQLEWQQMIKNFYTPFQKKVAEAREEAIDKSLTSRELGEDPATGKKVSVRIGKYGPYVQIGDVEDEEKPRFASLQKGQLMETITLDEAFELFKLPRQVGFFEDKDMIVNVGKFGPYVKHDGKYYSLAKTDDPMAVTEDRLVEIIEEKRLQDSNRTIKEFAEDPEAKVLNGRYGPYIAFGKKNVKIPKGTEPASLTYEQVLKLAAETPDKPAGRGGARKPAAAKAPAAKKPAAKKAAKK
(678) DNA topoisomerase III [Dyadobacter fermentans DSM 18053]
7
MKVCIAEKPSVAKDIAAVIGAGQRRDGYYEGNGYQVTWTFGHFCTLKEPHDYTERWKSWRLEELPMIPSSFGIKLIDNEGAMRQFGVIETLVRNCEEVINCGDAGQEGELIQRWVLLKAKCNVPVKRLWISSLTEQAIREGFEKLREASQYDNLYAAGSARAIGDWLLGMNATRLFTKKFGGGKAVLSIGRVQTPTLALIVQRQKEIDAFVSEEYWELKTIYRETEFTATIDRIKNVEKANKGLAYLQQHDFEVTAFEKKEGKEGNPRLFDLTSLQVEANKKYGYSAEDTLKHIQNLYEKKFVTYPRVDTTYLSEDLHPKVEGILRELTYYSQFTAPLLANLPIPKSKNVFDDKKVTDHHAIIPTGVLPAHISQDEKRIYDLIARRFIAVFYPECRVSNTTVLGVVGQVEFKATGKQILEPGWRELYANDNASKKEAEEEKVMPIFEVGERGPHEPRVHQGKTSPPKAYTEATLLRAMETAGKQVEDEEMRELMKDSGIGRPSTRANIIETLFKRKYIEKKKKNVFATQTGIDLIDTIQNELLKSAELTGHWERKLRQIEKGEYAMDTFKQELIDMVVKLTHEVKNERARSITIVEEAPVAEKEEKPKKERKPREPKEDIAIETLNCPKCREHLLKKGKTAYGCSNFQACGFKIPFEFLGKKLTDKHIFDLLSKGKTVKIKGLQIPGSPDPIDARLVMNGDFNFEVG
Family distribution
Taxonomy tree
Dyadobacter fermentans DSM 18053