Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Verrucomicrobia
Informations
Name
Verrucomicrobia
Rank
phylum
# topoisomerases
5
Lineage and sub-taxa
Lineage
Bacteria
>
Chlamydiae/Verrucomicrobia group
>
Verrucomicrobia
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(1251) DNA topoisomerase III [Akkermansia muciniphila ATCC BAA-835]
7
MSKTLIIAEKPSVATDLARVLGKELGKFTRDKSGAFYQNDRAIITSAVGHLLEQKKPMTEEGKSLPWKFDYLPVIPRKFELEPIKQSEDRLKKVLQLARSKDVTEIVNACDAGREGELIFHNLARYGKWTKPTRRLWMQSMTDEAILNAWHGMRSEADMKPLTNAAVCRSESDWLVGLNSTRALTILQSRGGFNVTPAGRVQTPTLAILTQRELEIQAFEPEPYSEVWAEFDVQSGSYSGRWIDRDWKKNDHPHSRAERIWDPEQAAVIRDRCRGKAGTVTEEKKPVTTVAPLLYDLTSLQREAANRYGFSAKRTLQLAQECYEKHKVLTYPRTDSRYLPEDYLGKVYGIVGTVAEQNPEFAPFARDILDNKRIKPNRRVFDTKKVSDHFAIIPTGKMEKLTGDAQKLFEMVMARFLAVFFPAAVFEDTRRTTLITHQDGVTDAFLTTGRVLVEPGWQAVYGRKAGTSSKEELVPVRDGEQAALREIEIRNAMTKPPARYNEATLLAAMEGAGKLVHDEELAAAMSERGLGTPATRASIIEGLISQEYIVRDGRELLATRRGIELIALLERIGLKTLTSPSLTGEWEYKLKQMEQAALPRDSFMEGIKTLTGEIVKRVKDFREAQQQVELPEMELDCPSCHAHGLKNTLDAVSCRSCKFSIRKVISGRDMADEELKTLIVDGRTGILHGFTSRFGKPFEAGLELNDKFRATLYFPAREEDEAAGVEEAVKVASVAIPDMGEHDVMETAKAWKIPSLTLGKEHAAVSVSRTILGREIPLDQVLKILAEGKSDLMKGFISQRTKRPFDAYLVFNAKTGKIGFEFPPRERKYPAKNAAGKTEGKAEKTGRNAAKTAGKDSKSGGAAKKGRKQ
(1857) DNA topoisomerase [Methylacidiphilum infernorum V4]
7
MGKTLVIAEKPSVAQDIAEALGGFPKGRKDIYENDRMIISSAVGHVVELCLPAEMDSRHRQWSLSNLPILPSSFSLKPIQKHKDRLNLLLSLLHREDVDLIINACDAGREGELVFRYLIRFAQVNKPIQRLWLQSMTKDAIIEAFKNLRPLREVEGLACAAVSRSESDWLIGINGTRALTALHSNSKGFRLTSVGRVQTPTLALVVERDKEILSFQPKPYWEILATFRSKQGEYKAKWFSRNSQHEGEDNHPERIENEDQCQSIIEKCLNKEGIVTEEKKVSQQSPPLLYDLTSLQREANNRFGFSAQRTLQIVQSLYENHKLITYPRTDSKFLPEDYVPRVKEVLKNLSHGPFETFAREILSQNWVQPANKIFNNQKVSDHFAIIPTTHKPTTLNANEEKIYQLIVRRFLATFYPPAQWEITKRITVVEEESFRTEGKILKSAGWLKVYRDSNPAQNTEEDVLCPIEQGEKVLNLAMEKIAKETKPPAHFTEATLLSAMESAGKLVEDETLREAMAKKGLGTPATRAGIIEGLIEDGYIRRQDGKALVATPKAFALIELLSAAQIQTLRSAELTGEWEFKLQMMEKEKYSQEKFMEEIYQLTASIVDKAKALGSIANVKKALPLFTPQGKAIEETLYEYQAPDGSFHVNKYIAGRPLFPDELEKLISQRTIGPLKGFYNKKGQPFTATLKLEDERGTLRFEFEKDESQGEDKQILSEESLGSCPIDNSPVLEAKEYYACLNYFSDQNSHKCPFKVNKKILEQEISREEMKKLLLEKKTSLLTHFRSKKKKKNFSAYLVLKDKGKLGFEFPAGANNKNRTSSSTQKEKKEKETAAKKKPKRKKTSNQPTPKKGES
(118) DNA topoisomerase [Opitutus terrae PB90-1]
7
MPKILIVAEKPDVGRTLAAALLGRTFSGMGPHRGTLPTGEELTVVTARGHLFELAPPEAYDPKYAAWIVHDLPITPSTRWDFQQVPREDAANYIRILRDEIAAHLNDEIVNACDAGREGEVIFRKVMRGCGAKRSARYTRMWAQVMTEEGLREAFAQRAPSANYNGLGEAGFSRDEADWLVGMNVTVLATKTLPRGRGNWKVWSVGRVQTPTLALVDTRDRLIADFKPQPFWEAFGGFGDVEAKADLDAYAESADRPKLLGSPEVNTERSKKVFWSQEKANAFAAAAKAPPTYTVADKKGTRTERPPLPFDLQEVQKLCSKRRGLTGTESLAVLQDLYEKRKLLSYPRTDSRYLPTKLKARLHADLARVLAAVKATHPQLHLASQELMPAEVAAKARAFDDAKVSDHYGIVPTGATAGIAELEGHELFVFLAVLQMTLMALDEPARYQTVTRRYTQEGGAGPYAPAVFRTTREEIEVPGFTRWRKETEKKSAPLPAAQSSQATLDAVTLKELRTNPPDPYTDATLLDAMKYAGETVDPELDPEQADALIEVMKDRGIGTPATRAGIIDKLVARQFLERQGKAIVTTENGRQLIRELRARAPDFLSAQLTAEWELVLKQMERGEAKLNRGQFLDALLAQVVTLKQAFLAKTSRDIETAAVPVTEGTPVADAVCPKSQQPLLDRGPFFEAPGFPGLRLWKRAFGRTFSAAEYVALLTAVAAGKPHHVTGMKSGQGREFAADLVLNADGTKLEIHRPEPKKVKGVKCPKSGKLLLDHGTFFEASGWPGVRLYKNAFGRVFAAEDYLPILEGWKAGTPIVVTGLVSAKTGNPYSAKLVLDAATKKVRLEFGKDEPRAER
(811) DNA topoisomerase [Opitutus terrae PB90-1]
7
MKSLVIAEKPSVAADLARALGKIPKQGDHYENDQYVVSYAVGHLVELEMPEDIDKKKYGFWRLETLPIIPEKFGLKPIEESKDRFNALKKLLARKDIELVINACDAGREGELIFAYLYQLTKCKLPVKRAWMQTMTAEGIREAFAHLRDGEQMAGLAAAARCRSESDWLIGINGTRALTKRMFGSRAGNVASVGRVQTPTLAIVYSRELEIRNFKPRAYWQITATFEVTNGRYEGTYQRPDFKKSDADEHDRVDRIWEQAVAEAIVAACQGQPPAAVREEKKASTQIAPRLYDLTTLQREANNRFGLSARRTLQIAQALYERHKMITYPRTDSRALPEDYIPTVRETLKNLHGPLAPHAQQVLDQGWVRPNRRIFNNAQISDHFAIIPTAHEAKHLDEMEAKVFDMIARRFVAAFFPPAEFDITTRISTVAGRHEFKTEGKVLTVPGWLAVYGRTTVEDDAPGSKSLPALSDADRATVARGDDAPAQAKTLDPVLHAETTKPPPRYTEATLLSAMEGAGKLVDDEDLAEAMKERGLGTPATRADTIDGLINQKYMERGQRELIPTAKAEQLLQFLSAVHTDALTSPAMTGEWEFKLRQIEHGKFSREEFMQEVVEQTKGIVDRVKNFEEDDSAARETDIPSPTDNKPLRETLRGYKSHDGEFMVYKVIGGRKMEEPEIRELVTTGKIGPLDGFLSAKTHKRFSAVLRLVKDEEKGKWKTEYDFGDKVDLGTVEPFWTDPKTGVQLCEVGSSYVLRERDGEGWKQAFRVGRLMCQKPITREHAIQLVEQGKTELITAFISKKGRPFDAYLKRDGAKITWEFPPRAPKLDKDGKPIVRKAKAPPDLSKAKVLGQTKALNGEILEAGDSYYVRRPDQDNRIVFTMKRHVCQKEIPPGELHNLLENGRTNLIENFVSKRNTHFNAYLVLSKNRTKAEFEFPPR
(1498) DNA topoisomerase [Coraliomargarita akajimensis DSM 45221]
7
MKYLIIAEKPSVATDLSRALAKSLGKFEKKGKSRDAQFFDNENASITSAVGHLVELKMPKGPNGKNLPWNFNVLPAIPKHFDLQPIEQSASRLKHVLALAKKKDYDVIVNACDAGREGELIFQYIMEIGKITKPSKRMWMQSMTTGAIQEAWGALREGDEMKHLADAAKCRSESDWLVGLNSTRAMTCFRSRHGGFNITAAGRVQTPTLAILAKREREIKAFNPEDYWEVHGDFGVEKGNYEGRWFNPDFKKDETKPHGKAERIWDKEVAESIRERCTGKTGTVTEETKPSKQIAPQLYDLTTLQREAPFTAKNTLAITQALYERHKMVTYPRTDSRYLPEDYIAKVKETTRELANSNHPVAQWAAKSLEGDQIQFNKRVFNNAKVSDHFAIIPTGRMVKLSEQEAKVYDMIVKRFIAVFFPQAEFENTKRITTIDHGAEKDQFLTQGKTLVNPGWMAVYGRVAGVAAGKDELVAVNPGETAKVDAIRVEDKQTKPPARFTESTLLSAMEGAGKLVDDDELREAMSERGLGTPATRAAIIEGLLRQKYIARDGRDLNVTGKGLRLIELCEEMKIEALTSPSMTGDWEAKLNKMQHGEFGRAEFMKEIVGFTEDVVAKAKSHMDAMVNRVFPDLETACPNCGAPRLKQTDATYECRDVDCDFKVSKHIAGRRLSDDEAIKLFTEKELPELEGFRSRFNKPFSAGLKLARTVSKTGKIGKWKIDFVFDEELEPSEDLRDDQIIKELALPDGTAAKLYATEKAYHLPQLKTKDAPEGFRLGKTILQRELQPAEVESLFATGKTPLIEGFISKRTKRPFKAFLTLDFDSGKIGFEFAPRGNAKKDEKKES
Family distribution
Taxonomy tree
Verrucomicrobia