Selection 1

Selection 2

Selection 3

All selections

Taxon : Pedobacter

Informations

Name	Pedobacter
Rank	genus
# topoisomerases	6

Lineage and sub-taxa

Lineage	Bacteria > Bacteroidetes/Chlorobi group > Bacteroidetes > Sphingobacteriia > Sphingobacteriales > Sphingobacteriaceae > Pedobacter
Sub-taxa

Topoisomerases

Select all	Name	Family	Sequence
	(1387) DNA topoisomerase type IA central domain protein [Pedobacter heparinus DSM 2366]	7	MKIVIAEKPSVGRELAKVFGATTKKDGYIEGKGYSFTWAFGHLLQLAPPQEYGFIGWRRQHLPMLPKKFKLAIRKIKTKDGMVEDPGVRKQLDIIKKLFDEATEIIVATDAGREGELIFRYIYYFLKCKKPFRRLWISSQTDEAIKEGFRNLKPGTDYDTLFNSAHCRSESDWLVGMNATQALSISAGNRSVLSLGRVQTPTLAMICSRFLEIKNFVPQTYYQLAIQLDKDGQLFRAMSVSNFDKKEEAEELLAKIEDVASGFSNGGKILSVEAKPRKEPPPLLHDLSSLQQEANKRKGFTADQTLSLLQGLYESKLVTYPRTGSRYIGDDIFAGVPALIDKVRGHKDFGKQAEFLLTVPLNKRSVNAKKVTDHHAILPTGESPYQLNGDKQAVYDMVVGRMIEAFHQECVKEITKISVESGSLFIANGTVIRAAGWRSVFNESDEEKKDEDNPALPKLKKGEELPVTNKALLEKQTKPKAMYNEASLLKALETSGKDIEDEELRYAMKDSGLGTPATRAAIIETLISREYVSREKRNLVPTTKGLAVYDVVKDQKIAQAELTGQWEKRLEEIRSGASVSDFKAEIADYTKTITNELLAAGLTLAEKI
	(2) DNA topoisomerase 1 [Pedobacter heparinus DSM 2366]	1	MAKNLLIVESPAKAKTIEGYLGKDFLVKSSYGHIRDLVKGDMAIDTANNFAQTYEVPSDKKQVVAELKKLAKDAEMVWLASDEDREGEAISWHLYETLGLKENKTKRIVFHEITKPAILKAIETPRSIDYNLVNAQQARRVLDRLVGFELSPVLWKKIKPSLSAGRVQSVAVRLIVDREREVNKFNAAAAFKITAEFVTGNGKELVKAELPQRFEKEADAEKFLNDCAGAGFSVDSLETKPAKRNPAAPFTTSTLQQEASRKLGYSVSRTMQIAQRLYESGRITYMRTDSVNLSETALQAAASEIRSAWGDKYHQPRTYKTKSAGAQEAHEAIRPTYFNQHTVPGDSSEQRLYELIWKRAIASQMSEALFEKTTAQIGISTRKEQLIAEGEVLKFDGFLKVYLESSDEEDAEDSEGNNMLPALSRGQALTLKVMNATERFSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVVKEDRDGRQRSFAAIELSNGSVTKKTKTEITGAEKGKLFPTDIGEVVNDFLVEHFKGIVDFNFTANVEKEFDEIAQGLQEWTKMLHSFYTPFHLEVENTLETADRANGERLLGLDPATGKNVYTKVGRFGPLVQIGENDDEEKPRYASLSKSQSVGTVTLEEALEQFKLPFSLEDYQGKEVSVGVGRFGPYVKWGDAFISVPKNEDPLSIDQARAIEIIGEKITADAPVAHYQGMPVTKGTGRFGPFIKWNDLFINVPKAYNFDRLSQQDIEELIGKKIEKEANRFIQQWPAEKIAIENGRWGPFIRFGKEMLKLRKNPATNDKYTPEELASIALDEVKKLIVEQVPNAFEPKKKAAAKKTGAAKKAPAKKKAVAKK
	(1571) DNA topoisomerase [Pedobacter saltans DSM 12145]	7	MKVVIAEKPSVGRELAKVFGATTRKDGYIEGKGYTFTWAFGHLLQLAPPQEYGFYGWRKENLPMLPQKFKLSIRKIKTKDGVVEDPAVKKQLDTIKRLFDECDEIIVATDAGREGELIFRYIYYYLKCKKPFRRLWISSQTDEAIKNGFRNLKPGTEYDTLFNSAHARSQSDWLVGMNATQALSISAGNKSVLSLGRVQTPTLAMICARFLEIKNFVPKIYYQVAIQLCKDEQFFKAISTKNFDTKEEAEEVLAKVLDVESGSPTGGHIKNVEGKAKKEPPPLLHDLSSLQQEANKKKGYTADQTLGILQNLYESKLVTYPRTGSRYIGDDIFATVPDLISKYKNHGLFGKSAEYLLENKLNKRSVNAKKVTDHHAVLPTGIDPGYLPEDKQAVYDMVVGRMLEAFHQDCIKETTKISIESGSDFVANGTVIKIAGWRSVFNDPDDEKKDASENATLPKVDKGENLPVTKKAVVEKQTKPKPQYTEATLLKALETCGKDIEDEELRYAMKDSGLGTPATRAAIIETLITREYISREKKNLIPTSKGLAIYEVVKEKKIAQAELTGQWEKRLEEIRGGASVLDFKNEIIDYTRNITQELLAAGIGLEKVLVTG
	(35) DNA topoisomerase III [Pedobacter saltans DSM 12145]	7	MKAIIAEKPSVAREIATLLGATEKRDGYLTGNGYEVTWALGHLVGLAMPEDYGVSGFQREALPILPNPFLLTVRKIKKDKSYVPDNGALKQLNIIEQVIGRCDSIIVATDAGREGELIFRYIYEYLKCRKPFERLWISSLTEKAIKQGFDNLKAGSDFDGLYRAGQGRSKADWLVGINASQALSISAGRGVYSLGRVQTPTLALICKRYLENKDFAVKKYFQIQLEHRKEFTDFKSLSKTKWDDRKLADDTLKSIQRNGTATVTAMETKTVTEQPPLLFDLTGLQKEANKRASYTAEETLNIAQSLYEKKFITYPRTGSKYIPEDMWSEIPALVRNLEARASCKKAVGKVKWGRFNKRIVNDVKVTDHHGLLITEKIPSELTAHENVIYDMIAYRLLEALSSACTKEITDIGLQAFHYDFTLKGCKIIEAGWRGIKGKFTDEDSDPVQELPELKVGDELKIKVASVLEKITKPPVLYTEAGLLSAMENAGKEIDNEDERKALKDIGIGTPATRASIIETLFKRDYIRREKKSLIPTHKGLQVYGAVKDKKIADVAMTAEWEMALQKIENNDANADAFHRDMETYATFITRELLDTGIAKEKQPELTCPKCKSRQLLVWNKVVKCPDEACGWLQFRIVCGVPLSVADIESLVTKGKTNLIKGMKSNSGNKFNAYIVMNDKAETSFEFENRKPKRK
	(1349) DNA topoisomerase III [Pedobacter saltans DSM 12145]	7	MKTIIAEKPSVAREIAGLVGASDKKDGYLTGNGYFVTWAFGHLIGLGMPEDYGISGFDKASLPILPNPFLLTVRKVKKDKGYTADTGALKQLKVIEQLFKQSNSIIVATDAGREGELIFRYIYEYLKCNKPFERLWISSLTEKAIKQGFNNLKDGAAFDGLYQAAQGRSRADWLVGINATQALSIAAGNGIYSLGRVQTPTLALICKRYLDNKNFTVKKYWQIQLTHNKAQVDFKSISATKWDEKQLADDTLKAIQRGATATFTSVETKSVTEQPPLLFDLTGLQKEANKRLKLSAEATLNIAQSLYEKKFITYPRTGSKYIPEDMWAEIPNLVRALQNREDCKQALTKIKWGRFNKRIVNDLRVTDHHGLLITDKVPSVLNADENKIYNMIALRLLEAISQACVKEITDVSLQVLHYDFTAKGCKIQEAGWRSIKGSFTDDGEEPVQELPELHKGDELAIKEAAVLEKQTKPPVLYTEAGLLSAMETAGKEIENEEERKALKNIGIGTPATRAAIIETLFTRNYIQRDKRSLIPTEKGLQVYGLVKDRKIADVAMTAEWELALQKIENNEADAGTFQKEMETYAKSITDELLQTSIASTNQPKLTCPKCKSQQLIIRDKIVKCPDEACNWVQFRTVCGVQISIENVTNLVNKGKTSLIKGMTSKAGKKFDAYIILKENAESSFEFEKNKSSKRNGK
	(1102) DNA topoisomerase 1 [Pedobacter saltans DSM 12145]	1	MAKNLLIVESPAKAKTIEGYLGKDFLVKSSYGHIRDLRKDDGAIEVDNNFKQHYEIPADKKQVVAELKKLAKSAETVWLASDEDREGEAIAWHLYESLGLKENQTKRIVFHEITKPAITKAIENPRTIDYNLVNAQQARRVLDRLVGFELSPVLWKKVKPSLSAGRVQSVAVRLIVEREREINLFNAESAYKIIAIFSTGKGKEIFKAELSQRYAEQKEAEKFLEDCKSALYKINDLDIRPTKRTPAPPFTTSTLQQEAGRKLGFSVSRTMSIAQRLYETGKITYMRTDSVNLSETALNASEIEINSAYGSKYHHKRIFKTKSAGAQEAHEAIRPTHFEWHTIEGDASEKRLYELIWKRAIASQMSEAQFEKTTARIGISTRKEELVANGEVLKFDGFLKVYLESEDEESDSHLDDKTDNGILPPLNIGQELILNEMTALERFTRPAARYSEASLVKKLEELGIGRPSTYAPTISTIQNRGYVVKEDRDGRSRTYKTFTLKDGEVKSIVKSEITGTEKGKLFPTDIGAVVNDFLVEHFKGIVDYNFTATVEKQFDEIANGLKEWTDMLKKFYQPFHSEVEDTLKNADRATGERLLGLDPESGKNVYTKVGRFGPMVQIGEMDEEDKPRYASLLKSQSVETISLEEALNLFQLPFQLSDYKDKEVSVGVGRFGPYVKWGDTFISLPKNEDPLTVTNERAIEIIEEKISIDAPVAEYQGHPVSKGKGRFGPFLKWKDLFINVPVRYNFDKLSQSDINELISAKIEKEANRYIQQWETEKIAIENGRWGPFIRFGKQMLKLGKNPTTGQKYTAEELSTVSLEDVKKLIVEQVPDAFDAKAKKTGRKTTKK

Family distribution

Taxonomy tree

Pedobacter