Toggle navigation
TopoIBase
Data
Taxonomy and VLD families
Downloads
My selection
Upload to selection
Selection 1
Selection 2
Selection 3
Tools
Blast
MUSCLE
VLD
About
How to use
Acknowledgements and references
Contact
Tests
Search more
Download
fasta
tsv
Download
Blast
Muscle
VLD
Add to selection
Selection 1
Selection 2
Selection 3
All selections
Taxon : Negativicutes
Informations
Name
Negativicutes
Rank
class
# topoisomerases
8
Lineage and sub-taxa
Lineage
Bacteria
>
Firmicutes
>
Negativicutes
Sub-taxa
Topoisomerases
Select all
Name
Family
Sequence
(1521) DNA topoisomerase [Veillonella parvula DSM 2008]
3
MRLFIAEKPSMAREISKCLPENKNIQKRNGYFIQGDDVVTWVVGHVLHQAEPGDYDDKYIRWRPQDLPIVPAEWKLLVTDSSRQQFEIVKDLIDKADVIVNAGDPDREGQLLVDEVLYYVGNTKPVQRILLNALDEKSIRSALDDLRDNKDFHNLYQSALARARADWLIGMNLSRAYTLSERYKGNKVTLPIGRVKTPTLALVVRRERELAAFKPVDYFTVKVLYNHPNGVFWATWQPTDEQKGLDPDGRLINKAIADSLVEQLQSGPDGVIKAVTKSKKKDVQRLPLSLSSLQVLAGKAFSYDPQTVLDTAQKLYEKKLTTYPRSDCEYLPPNQYDDRNAILNNLQNAGDERLAQWAADADRSIKSRAWNEKKITAHHAIIPTTVACNINSLSQEERNIYFLISQAYIAQFYGEHIYEQTKIVVEQCKEEFVANGRVVIEEGWKLLYKRHKSKSTTDNDEPDLTDERGAESDPKKEIIEETDHLPAVKKNDTVLYTDSSVEAKQTKPPSRFTPSTLLQAMKEIHKFVKNEDLKKQLKAVSGIGTEATRANIIDELISRGFMKTSGKKQVLSPTETGYLLVDALPEELLYPDETAVWEERLALMSEGEDTLDSFLADQIKFLKLLIDKLGFDKVINSDQMMPNVVRTITSQNRKRPMDSESVDLSSLPVCPKCKKGRLQQRNGKFGAFLGCTNYPTCKHTQPVEGDTSSVEGNIEVSDEDKQYKCPRCNVGYFVKQEVRGRTNWICSNRSQCKTQCSDVDGVPSIYVNKSNIT
(1689) DNA topoisomerase 1 [Veillonella parvula DSM 2008]
1
MSIKRSIVIGEPKAASTSKDTKKKNTKKESTTIKRKVAKESLTPMGIVRDKSVLQTSVPPEQREPRVYNPDGKVLVIVESPAKSKTIEKFLGPNYVVKASMGHLRDLPKSQIGIDIEHDFTPRYSNLVTRKKVIDELVSYADESSAVLLATDPDREGEAISWHLAYILNVDPTSTCRITFNEITKNAVAEALDSPRTIDMNMVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSVAVRLICEREREIQAFVPQEYWTIEGNFETPKKEAFIAELTHIKGEKIDITTESDAQAIVDAIGNEDAVVTNIEKRKRSRKAVPPFTTSTLQQDGVRKLNFGAKRTMMIAQHLYEGLEIGSYGHVGLITYMRTDSTRISKEMQAMAKDFILRNYGEDYYPSKPNVYGSKGSAQDAHEAIRPTSLELTPKMVEPFLSRDELKLYTLIWNRFMASQMAPQQNESTTIELNVKNDYTFKATGSRVIFPGFSAVYEDAKKEDVPQLPALKKNYAAHTVEVLPEQHFTQPPPRYSEASLIKTLEELGIGRPSTYAPILDTIVSRNYVENTNKQFVPTELGFVVVDFLITYFEKIINTGFTRDLEEELDAIASGKDTYVKVLSDFYEVFAQELEDASDVDRIEIASMESDEICELCNSPMVYKFGRYGKFLACSNFPECKNTKPITVGTGVTCPKCKEGEIVERKSRRGRIFYGCNRYPQCDFTLWDKPTHDFCETCGSIMVEKTYKNGTVKKFCSNETCPTRPPKKTRKKKSEASEEPVKESKKSSKAKKEETTIES
(197) DNA topoisomerase 1 [Acidaminococcus fermentans DSM 20731]
1
MTNKLVIVESPTKAKTIEKFLGKTFTVRASMGHLRDLPKSQFGVDVEHHFTPKYINIRGKGPLIKELKTLAKKADKIYLATDPDREGEAIAWHLSYILGVDPAAACRISFHEITQTAIKGALKEPQAIDMDKVDAQQTRRILDRIVGYQLSPLLWRKIRKGLSAGRVQSVAVKIICDRQKLIDDFEPEEYWTSSVVLAPGKTPKITADVVKRDGKKLEIHNRAEADQVTEDLKKASYQVTDCAIRDRLRKPAPPFTTSSLQQEANKKMNFSTKKVMMLAQQLYEGVTLGRKGSVGLITYMRTDSVHLADAAVSEIRGYVDANYGPDYLPRKPNVYSSRKNAQEAHEAIRPTSVARTPEAVAPYLDRDQLRLYTLIWKRTVASQMASSISTLTTLTIAGDNYELRATGSVVKFDGFLKLADRKDEEKDKKVPALEKGTALNLIRVNEAVQHFTEPPANFTEATLVKELEEKGIGRPSTYSPIIQTILARGYVAKEGKKLLPTELGKLTIDMLTQYFSPFIDVPFSAHMESELDAISEHRTDKETVLQEFYGPFEKALKVADENIPVVEKPVIVSDVKCEKCGRFMVVKEGRHGKFLACPGFPECRNTKPILVKVGVKCPQCGGELIERHSKTGRLFYGCANYPTCRFTSWDKPTSEKCPQCGSMMVEHKERNGKTVLHCSNEKCPNASLRKK
(766) DNA topoisomerase 1 [Acidaminococcus intestini RyC-MR95]
1
MANLVIVESPTKSKTIGRFLGKNYTVKASMGHLRDLPKSQFGVDVDHDFEPKYINIRGKGDLIKELKTLAKKADKIYLATDPDREGEAIAWHLGYLLGVDPESNCRISFHEITPHAVKEAIKHPAAIDMDKVDAQQTRRILDRIVGYKLSPLLWRKIAKGLSAGRVQSVAVKIICDRQKEIDAFEPQEYWTSSVTLTADKPSHKFTAEVTKKEGKKLVIHNEEEARTVTKELLNQSYAVASSAVKDRIRRPIAPFTTSSLQQEAVKRLNFTTKKTMMLAQQLYEGIALEKRTPVGLITYMRTDSVHLASVAVAEIRNYIGEVYGDAYLPKKPNVYSSRKNAQEAHEAIRPTSVMRTPDEVAPYLERDQLRLYRLIWERTVSCQMAPSVSEVTTLIINGGPYELRASGSVVNFDGFLTLMDKKELAGEKTKKVPHLKEGTPLTLISVDDAIQHFTEPPAYFTEATLVKELEEKGIGRPSTYATIIQTILSRGYVAKEAKKVMPTELGMTTIELLTQYFPNLIDVPFSAHMENELDAISEHKTKKETVLKEFYGPFEKELEIADREIPVKPQEVIVSDVKCEKCGRMMVVKTGRHGKFLACPGFPECRNTKPYYEKIGVACPLCGHDLIVRKTKTGRTFYGCSHYPECHFTSWDKPINETCPLCGHIMLEAVQRGGKVVHHCSNPECPNSGAKKSGLKKVSAKAALAKTEGTAEKTVKKTTAKKTTTAKKTAVMKTASTKKTASTKKTAVKKTGKE
(1546) DNA topoisomerase 1 [Selenomonas sputigena ATCC 35185]
1
MPTAQKKTPQEKNREVVGQAEKKEGKRAAGKGAAKTAAVEKPAAKKSAVKKASAKKTATKKSAARDSTATTSAAEKKPAAKKSAPKKTVAKKTVAKKTVAKKTAAKKTAAKKEAPQTLVVVESPAKAKTIEKYLGKKYMVRASMGHLRDLPKSQFGIDVENDFAPKYINIRGKGDLIKALKKDAKHAAKVYLASDPDREGEAIAWHLAHILGIDPNENCRIVFNEITKPAIQAAVKEPYPINLDRVDAQQARRMLDRIVGYKLSPLLWRKIKKGLSAGRVQSVTVKLICDREKEIQAFVPEEYWTVGMKLKKGRGAQFAAELATVDGKKLALHSKEETSALVKDMAKQSFSVKEVKKRERRRNPVAPFTTSSMQQDASRKLGFTSRRTMMIAQQLYEGVELGRRGPVGLITYMRTDSTRLSDLALDEVRGYVGTSFGADYLPEKPNIYAAGKKAQDAHEAIRPTSVENTPELMEKYLSREQLRLYTLIWQRFVASQMTPAVFDTVSVSVAAGERYIARASGSTLKFPGFLAVYADNKKEKDVLLPELAAGEALSLLDLLPEQHFTEPPPRYNEASLVKTLEEEDIGRPSTYAPIIETILARGYVVRQDKHFQPTDLGFLVNDMLEEHFKDIVDVQFTAGLENELDEIAEGKVDKNDLLRGFYEPFEKTLEEADEAIGEVEIPEEVSDVICEKCGRNMVVKQGRYGKFLACPGFPDCRNTKPLLKDTGVPCPKCGGRIVERRSRRGQAFYGCENYPACDYVTWDQPLTEKCPECGAFMLRHRYKNGRILPYCSNEECKTRIDHPINKEIEKSRARLEAKKAKEAAAAEKAAEAEATT
(1108) DNA topoisomerase [Selenomonas sputigena ATCC 35185]
7
MRLYIAEKPSMGREIAKCLEGPVRAHDGWLETAEGAVTWGFGHILRQKEPEEYSEKYKFWRTEDLPIVPAEWQLVVAPSAARQFRIVKDLIARADEIVHAGDPDREGQLLIDEVLDFVGNEKPVKRILLNALDEKSIREANADLRENSDFYALKQSALARARADWLIGMNLSRAYTLAARRAGHKKLVLPVGRVKTPTLALVVRREREIEGFKPVDYFEIRVKFRHADGDFTAVWKPREEEPGLDREGRLVDEAAAQARLAGFAEPPADGHVTELHRAKKTEGQRLPFSLSSLQVLAGRKYGYEPQLVLDTAQKLYEKKLTTYPRSDSEYLPLNQRKDASAILAHLRDGDDAALSHWAGGADAKIKSRAWNDKKVTAHHAIIPTRVRARLGTLTETEENIYRLIAQAFIAQFYPEHVYEKTHAVLDYHGEVFAVNGRREIQAGWRAIYRTAKKGAGEEADAGDADGEEEDGGVLPPLKKGDAVTYLSGALKKRATKPPPRFTPATLLQGMKEIHKYVLDPEAKKRLKDVYGIGTEATRAAIIDDLIKRRFLSAKGKKKLLYPTDTAYLLVDALPDDLVYPDATALWEDKLHSMADGEGTLEEFLSAQVAFTRRLVAKALDAKIERGGEHPCPRCQNGVLVKRRGKNGDFWGCSNYPRCRMSCDDKEGKPDLGSRAPRAASARSAPSRAGQKDVRPARNFGAPALSEEEMAAFLAEYAPLPSAQEMMNSPSDGKKGAGKAKAVVE
(1547) DNA topoisomerase 1 [Selenomonas sputigena ATCC 35185]
1
MPTAQKKTPQEKNREVVGQAEKKEGKRAAGKGAAKTAAVEKPAAKKSAVKKASAKKTATKKSAARDSTATTSAAEKKPAAKKSAPKKTVAKKTVAKKTVAKKTAAKKTAAKKEAPQTLVVVESPAKAKTIEKYLGKKYMVRASMGHLRDLPKSQFGIDVENDFAPKYINIRGKGDLIKALKKDAKHAAKVYLASDPDREGEAIAWHLAHILGIDPNENCRIVFNEITKPAIQAAVKEPYPINLDRVDAQQARRMLDRIVGYKLSPLLWRKIKKGLSAGRVQSVTVKLICDREKEIQAFVPEEYWTVGMKLKKGRGAQFAAELATVDGKKLALHSKEETSALVKDMAKQSFSVKEVKKRERRRNPVAPFTTSSMQQDASRKLGFTSRRTMMIAQQLYEGVELGRRGPVGLITYMRTDSTRLSDLALDEVRGYVGTSFGADYLPEKPNIYAAGKKAQDAHEAIRPTSVENTPELMEKYLSREQLRLYTLIWQRFVASQMTPAVFDTVSVSVAAGERYIARASGSTLKFPGFLAVYADNKKEKDVLLPELAAGEALSLLDLLPEQHFTEPPPRYNEASLVKTLEEEDIGRPSTYAPIIETILARGYVVRQDKHFQPTDLGFLVNDMLEEHFKDIVDVQFTAGLENELDEIAEGKVDKNDLLRGFYEPFEKTLEEADEAIGEVEIPEEVSDVICEKCGRNMVVKQGRYGKFLACPGFPDCRNTKPLLKDTGVPCPKCGGRIVERRSRRGQAFYGCENYPACDYVTWDQPLTEKCPECGAFMLRHRYKNGRILPYCSNEECKTRIDHPINKEIEKSRARLEAKKAKEAAAAEKAAEAEATT
(882) DNA topoisomerase [Megamonas hypermegale ART12/1]
1
MASMGHLRDLPKSQFGIDVENDFAPKYINIRGKGDLIKSLKKEAKKSEKVYLASDPDREGEAIAWHLSHILGIDEHEKCRIVFNEITKPAIQEAVKNPKEINIDRVDAQQARRMLDRIVGYKLSPLLWKKIRKGLSAGRVQSVTVKLICDREKEIQKFESEEYWTVDFKFKKKPRSSMFGAELVAIDDKKLMVSAKKEDVKIASKAQADELCSDIEKVTFKVTEIKKRQRHRKAPAPFTTSSLQQDAARKLGFTSRKTMMIAQQLYEGISLGKKGPTGLITYMRTDSTRISEIALNEARNYIEENFGKEYLPEKPYIYAAGKSSQDAHEAVRPTNIALSPATVEEYLSKEQLKLYKLIWQRFLGCQMLPASYDVMSVTIKGDKYLAKATGSQLKFAGFTAVYNDSDNKKKKMSSCQICKKAMNYLFKN
Family distribution
Taxonomy tree
Negativicutes